RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 IQCF6A8MYZ5 107 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 GAGE7O76087 117 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 GAGE4Q13068 117 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 ODF1Q14990 250 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 TWIST1Q15672 202 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 TBC1D28Q2M2D7 210 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 TUSC5Q8IXB3 177 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 TMEM158Q8WZ71 300 aa10.4□□□□□ -0.74
CNKSR3-204ENST00000479339 LINC01546A6NGU7 62 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 ATP5LO75964 103 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 FAM104BQ5XKR9 115 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 SGK494Q96LW2 274 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 CITED1Q99966 193 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 C12orf49Q9H741 205 aa10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 BEX4Q9NWD9 120 aaPredicted RBP10.4□□□□□ -0.75
CNKSR3-204ENST00000479339 SPG11Q96JI7 2443 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 DPM2O94777 84 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 HOXB4P17483 251 aaPredicted RBP10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 ERHP84090 104 aaKnown RBP10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 FHL3Q13643 280 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 SRSF12Q8WXF0 261 aaKnown RBP10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 OTORQ9NRC9 128 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 F8P00451 2351 aa10.39□□□□□ -0.75
CNKSR3-204ENST00000479339 CFHR2P36980 270 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 LOXL3P58215 753 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 NFE4Q86UQ8 179 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 CXorf67Q86X51 503 aaPredicted RBP10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 SMIM20Q8N5G0 67 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 PPP1R35Q8TAP8 253 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 Q9H3A6 140 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 RHODO00212 210 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 WNT9BO14905 357 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 CNIH1O95406 144 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 IL4P05112 153 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 SUB1P53999 127 aaKnown RBP eCLIP10.38□□□□□ -0.75
CNKSR3-204ENST00000479339 HIVEP1P15822 2718 aa10.37□□□□□ -0.75
CNKSR3-204ENST00000479339 MYOD1P15172 320 aa10.37□□□□□ -0.75
CNKSR3-204ENST00000479339 FOXG1P55316 489 aaPredicted RBP10.37□□□□□ -0.75
CNKSR3-204ENST00000479339 HIST1H4GQ99525 98 aa10.37□□□□□ -0.75
CNKSR3-204ENST00000479339 HRNRQ86YZ3 2850 aaPredicted RBP10.37□□□□□ -0.75
CNKSR3-204ENST00000479339 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 CENPVL3A0A0U1RRI6 287 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 FABP5P3A8MUU1 101 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 RBP4P02753 201 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 GP9P14770 177 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 ZNF134P52741 427 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 MLANAQ16655 118 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 Q6Q795 121 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 CIARTQ8N365 385 aaPredicted RBP10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 PRRC2AP48634 2157 aaKnown RBP10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 ASIPP42127 132 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 Q6ZT83 130 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 C11orf53Q8IXP5 236 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 GLMPQ8WWB7 406 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 UBTD1Q9HAC8 227 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 HIF1ANQ9NWT6 349 aa10.36□□□□□ -0.75
CNKSR3-204ENST00000479339 IGKV1D-37A0A075B6S9 117 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 J3KRW8 73 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 HOXA3O43365 443 aaPredicted RBP10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 SAA2P0DJI9 122 aaPredicted RBP10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 FCER1GP30273 86 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 NDUFV3P56181 108 aaKnown RBP10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 EDDM3AQ14507 147 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 ZC2HC1BQ5TFG8 222 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 LRRC75A-AS1Q8N1F1 130 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 TMEM75Q8N9X5 138 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 DCTN5Q9BTE1 182 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 ABCA4P78363 2273 aa10.35□□□□□ -0.75
CNKSR3-204ENST00000479339 IGLV2-11P01706 119 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 PPIFP30405 207 aaKnown RBP10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 MRPL51Q4U2R6 128 aaKnown RBP10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 MORN3Q6PF18 240 aaPredicted RBP10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 PRNTQ86SH4 94 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 MDP1Q86V88 176 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 SBSPONQ8IVN8 264 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 SLC25A39Q9BZJ4 359 aaPredicted RBP10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 OBP2BQ9NPH6 170 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 NDUFA4L2Q9NRX3 87 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 BRI3O95415 125 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
CNKSR3-204ENST00000479339 GTSCR1Q86UQ5 136 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms