RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 C19orf71A6NCJ1 209 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 F2Z2F3 143 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 CHEK1O14757 476 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 FSHBP01225 129 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 RPLP1P05386 114 aaKnown RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 CD33P20138 364 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 EDN2P20800 178 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 PSMB8P28062 276 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 S100A2P29034 98 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 CSN1S1P47710 185 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 DEFB1P60022 68 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 ERCC8Q13216 396 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 SLAQ13239 276 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 PYY3Q5JQD4 70 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 MUC21Q5SSG8 566 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 GDF5OSQ5U4N7 250 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 CYB5R2Q6BCY4 276 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 PRSS57Q6UWY2 283 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 FAM231DQ6ZW35 169 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 TSKUQ8WUA8 353 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 USMG5Q96IX5 58 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 PGLYRP4Q96LB8 373 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 HIST1H2BLQ99880 126 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 FBN1P35555 2871 aaKnown RBP3.15□□□□□ -1.9
USP25-208ENST00000478932 NOTCH1P46531 2555 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 A0A0G2JLM5 398 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 A8MWL6 223 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 S100A9P06702 114 aaKnown RBP3.15□□□□□ -1.9
USP25-208ENST00000478932 PSG9Q00887 426 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 CFHR3Q02985 330 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 CDPF1Q6NVV7 123 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 TMEM136Q6ZRR5 245 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 C8orf86Q6ZUL3 223 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 PRR25Q96S07 402 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 GNB1LQ9BYB4 327 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 RPP21Q9H633 154 aaKnown RBP3.15□□□□□ -1.9
USP25-208ENST00000478932 ZFP30Q9Y2G7 519 aa3.15□□□□□ -1.9
USP25-208ENST00000478932 NBEAL1Q6ZS30 2694 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.15□□□□□ -1.91
USP25-208ENST00000478932 TRAV8-2A0A0B4J237 113 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 IZUMO1RA6ND01 250 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 AMBPP02760 352 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 S100A8P05109 93 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 CRISP2P16562 243 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.91
USP25-208ENST00000478932 C1orf194Q5T5A4 169 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 Q6ZQT7 251 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 GBGT1Q8N5D6 347 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 SIGLECL1Q8N7X8 197 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 TMEM75Q8N9X5 138 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 SMIM12Q96EX1 92 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 GRAMD2BQ96HH9 432 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 PACRGQ96M98 296 aaPredicted RBP3.15□□□□□ -1.91
USP25-208ENST00000478932 RHPN1-AS1Q9BWJ2 59 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 NPFFR1Q9GZQ6 430 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 NIT2Q9NQR4 276 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 U3KQE9 123 aa3.15□□□□□ -1.91
USP25-208ENST00000478932 TRAV9-1A0A075B6T8 112 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 A8MWP6 167 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 NDUFA4O00483 81 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 CT45A10P0DMU9 189 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
USP25-208ENST00000478932 DEFB136Q30KP8 78 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
USP25-208ENST00000478932 C9orf139Q6ZV77 190 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 BAGE3Q86Y29 109 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 GPHB5Q86YW7 130 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 C16orf92Q96LL3 132 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 SMR3AQ99954 134 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 AGPAT4-IT1Q9H0P7 198 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 DAZ1Q9NQZ3 744 aaKnown RBP3.14□□□□□ -1.91
USP25-208ENST00000478932 PEF1Q9UBV8 284 aaKnown RBP3.14□□□□□ -1.91
USP25-208ENST00000478932 TP53TG3Q9ULZ0 132 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 NPIPB6E9PJ23 425 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 F6UB75 175 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 H3BUA1 57 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 J3KRW8 73 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 ZNF253O75346 499 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 SERF1AO75920 110 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 BRI3O95415 125 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 APCSP02743 223 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 ARMS2P0C7Q2 107 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 SRIP30626 198 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 S100A7P31151 101 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 LINC00310P59036 64 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 C16orf54Q6UWD8 224 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 RBPMS2Q6ZRY4 209 aaKnown RBP3.14□□□□□ -1.91
USP25-208ENST00000478932 ZNF575Q86XF7 245 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 C11orf44Q8N8P7 122 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 GLMPQ8WWB7 406 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 RCHY1Q96PM5 261 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 DUX3Q96PT4 197 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 ATP6V0BQ99437 205 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 ZNF702PQ9H963 129 aa3.14□□□□□ -1.91
USP25-208ENST00000478932 SH2D1AO60880 128 aa3.13□□□□□ -1.91
USP25-208ENST00000478932 HLA-DQA1P01909 254 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms