RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RMI2Q96E14 147 aa7.62□□□□□ -1.19
HDAC8-217ENST00000478743 S100A16Q96FQ6 103 aaKnown RBP7.62□□□□□ -1.19
HDAC8-217ENST00000478743 ZC2HC1AQ96GY0 325 aa7.62□□□□□ -1.19
HDAC8-217ENST00000478743 RTBDNQ9BSG5 229 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-217ENST00000478743 ARV1Q9H2C2 271 aa7.62□□□□□ -1.19
HDAC8-217ENST00000478743 C8orf4Q9NR00 106 aa7.62□□□□□ -1.19
HDAC8-217ENST00000478743 CD3DP04234 171 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 GPX1P07203 203 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 CRISP2P16562 243 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 SMCO1Q147U7 214 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 SAMD12Q8N8I0 201 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 ARL6Q9H0F7 186 aa7.61□□□□□ -1.19
HDAC8-217ENST00000478743 PITX3O75364 302 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 TMEM183BQ1AE95 376 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 VWC2Q2TAL6 325 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 ATRAIDQ6UW56 229 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 TMEM183AQ8IXX5 376 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 BOLA1Q9Y3E2 137 aa7.6□□□□□ -1.19
HDAC8-217ENST00000478743 IGKV2-40A0A087WW87 121 aaPredicted RBP7.59□□□□□ -1.19
HDAC8-217ENST00000478743 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 MUC21A0A0G2JKD1 596 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 B3GALNT1O75752 331 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 IGKV2D-40P01614 121 aaPredicted RBP7.59□□□□□ -1.19
HDAC8-217ENST00000478743 S100A7P31151 101 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 RAB11AP62491 216 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 SCGB2B2Q4G0G5 96 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 C14orf177Q52M58 125 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 RNASE10Q5GAN6 216 aaKnown RBP7.59□□□□□ -1.19
HDAC8-217ENST00000478743 FAAP20Q6NZ36 180 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 LYZL2Q7Z4W2 148 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 ZFAND1Q8TCF1 268 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 Q9UF83 564 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 VAX2Q9UIW0 290 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 PXMP4Q9Y6I8 212 aa7.59□□□□□ -1.19
HDAC8-217ENST00000478743 SMCO3A2RU48 225 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 H3BP45 60 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 TNFAIP8O95379 198 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 LINC00694P0DN24 101 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 CCR6P51684 374 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
HDAC8-217ENST00000478743 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 NIT1Q86X76 327 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 Q8TAT8 98 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
HDAC8-217ENST00000478743 LOC100506127A0A0U1RQW1 187 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 OR10J4P0C629 311 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 SLC38A11Q08AI6 406 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
HDAC8-217ENST00000478743 RHOHQ15669 191 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 PRR4Q16378 134 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
HDAC8-217ENST00000478743 FABP12A6NFH5 140 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
HDAC8-217ENST00000478743 ZNF253O75346 499 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 AQP4P55087 323 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 UBE2MP61081 183 aaKnown RBP7.56□□□□□ -1.2
HDAC8-217ENST00000478743 DGAT2L7PQ6IED9 249 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 BPIFA4PQ86YQ2 179 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 TERB2Q8NHR7 220 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 SPXQ9BT56 116 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 SRRQ9GZT4 340 aa7.56□□□□□ -1.2
HDAC8-217ENST00000478743 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC8-217ENST00000478743 BAK1Q16611 211 aa7.55□□□□□ -1.2
HDAC8-217ENST00000478743 GTSF1Q8WW33 167 aa7.55□□□□□ -1.2
HDAC8-217ENST00000478743 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 C5orf51A6NDU8 294 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 H7C1H1 209 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 M0R2P5 195 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 WRBO00258 174 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 NDUFB4O95168 129 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 RPL19P84098 196 aaKnown RBP7.54□□□□□ -1.2
HDAC8-217ENST00000478743 GAGE1Q13065 139 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 GAGE4Q13068 117 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 GAGE5Q13069 117 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 EXOC3-AS1Q8N2X6 119 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 C2orf50Q96LR7 162 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 CACFD1Q9UGQ2 172 aa7.54□□□□□ -1.2
HDAC8-217ENST00000478743 C14orf166Q9Y224 244 aaKnown RBP7.54□□□□□ -1.2
HDAC8-217ENST00000478743 GNRH2O43555 120 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 RRAS2P62070 204 aaPredicted RBP7.53□□□□□ -1.2
HDAC8-217ENST00000478743 SPANXN5Q5MJ07 72 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 OR52I2Q8NH67 350 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 RAB2BQ8WUD1 216 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
HDAC8-217ENST00000478743 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 OR51M1Q9H341 326 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 ZNF492Q9P255 531 aa7.53□□□□□ -1.2
HDAC8-217ENST00000478743 A0A0B4J2A0 478 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms