RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ODF3Q96PU9 254 aa8.28□□□□□ -1.08
SRRT-211ENST00000478693 VGLL1Q99990 258 aa8.28□□□□□ -1.08
SRRT-211ENST00000478693 BOLA1Q9Y3E2 137 aa8.28□□□□□ -1.08
SRRT-211ENST00000478693 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 ZNF705EA8MWA4 302 aaPredicted RBP8.27□□□□□ -1.09
SRRT-211ENST00000478693 GGTLC3B5MD39 225 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 DEFB4AO15263 64 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 HBE1P02100 147 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 MIFP14174 115 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 ZNF138P52744 262 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 CST9LP1Q5W188 147 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 ALKAL2Q6UX46 152 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 C9orf47Q6ZRZ4 202 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 CSNK1G2-AS1Q8NCQ2 148 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 MBD3L1Q8WWY6 194 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 AGPAT4-IT1Q9H0P7 198 aa8.27□□□□□ -1.09
SRRT-211ENST00000478693 YTHDF2Q9Y5A9 579 aaKnown RBP8.27□□□□□ -1.09
SRRT-211ENST00000478693 IGHV4-28A0A0C4DH34 117 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 SERTM2A0A1B0GWG4 89 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 FAM74A7A6NL05 159 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 TCRAP04437 139 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 GPX1P07203 203 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 HTN1P15515 57 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 PPT1P50897 306 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 RRN3P1Q2M238 152 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 GFI1BQ5VTD9 330 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 ARL6IP6Q8N6S5 226 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 LINC01587Q99440 93 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 NDFIP1Q9BT67 221 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 NKX6-2Q9C056 277 aaPredicted RBP8.26□□□□□ -1.09
SRRT-211ENST00000478693 ZNF492Q9P255 531 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 X6R8D5 127 aa8.26□□□□□ -1.09
SRRT-211ENST00000478693 PRKDCP78527 4128 aaKnown RBP8.25□□□□□ -1.09
SRRT-211ENST00000478693 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 C7orf71A4D174 169 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 CRXO43186 299 aaPredicted RBP8.25□□□□□ -1.09
SRRT-211ENST00000478693 PAGE4O60829 102 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 EMP1P54849 157 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 BTN1A1Q13410 526 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 ZNF705AQ6ZN79 300 aaPredicted RBP8.25□□□□□ -1.09
SRRT-211ENST00000478693 C1orf158Q8N1D5 194 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 TMEM256Q8N2U0 113 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 CYB561D1Q8N8Q1 229 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 SGK494Q96LW2 274 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 ATG101Q9BSB4 218 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 C11orf68Q9H3H3 251 aaKnown RBP8.25□□□□□ -1.09
SRRT-211ENST00000478693 EDA2RQ9HAV5 297 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 EPDR1Q9UM22 224 aa8.25□□□□□ -1.09
SRRT-211ENST00000478693 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 LOC102723971A0A1B0GUV8 181 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 F6UZH7 168 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 PEX7O00628 323 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 IFNA1P01562 189 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
SRRT-211ENST00000478693 ATP5G3P48201 142 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 KIR3DS1Q14943 382 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 Q8NAQ8 132 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 NEU1Q99519 415 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 C20orf144Q9BQM9 153 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 MANBALQ9NQG1 85 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 ARL2-SNX15V9GYD0 113 aa8.24□□□□□ -1.09
SRRT-211ENST00000478693 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
SRRT-211ENST00000478693 H7BYZ3 331 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 RBMY1A1P0DJD3 496 aaKnown RBP8.23□□□□□ -1.09
SRRT-211ENST00000478693 RBMY1CP0DJD4 496 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 CRISP2P16562 243 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 AKR1C3P42330 323 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 UBE2G1P62253 170 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 FLI1Q01543 452 aaPredicted RBP8.23□□□□□ -1.09
SRRT-211ENST00000478693 PMS2P11Q13670 270 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 RBMY1FQ15415 496 aaKnown RBP8.23□□□□□ -1.09
SRRT-211ENST00000478693 PRNTQ86SH4 94 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 CCDC28AQ8IWP9 274 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 IL17DQ8TAD2 202 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 PSG8Q9UQ74 426 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 LENEPQ9Y5L5 61 aa8.23□□□□□ -1.09
SRRT-211ENST00000478693 TRBV7-9A0A0J9YWB2 115 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 TMEM189A5PLL7 270 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 KLLNB2CW77 178 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 C11orf94C9JXX5 98 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 RGS13O14921 159 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 NMBP08949 121 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 TAS2R60P59551 318 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 MUC7Q8TAX7 377 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 TCEAL7Q9BRU2 100 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 TREM1Q9NP99 234 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 AGRNO00468 2067 aa8.22□□□□□ -1.09
SRRT-211ENST00000478693 DNAH9Q9NYC9 4486 aa8.21□□□□□ -1.09
SRRT-211ENST00000478693 TRAV1-1A0A0B4J248 108 aa8.21□□□□□ -1.1
SRRT-211ENST00000478693 TRAV34A0A0B4J273 112 aa8.21□□□□□ -1.1
SRRT-211ENST00000478693 CXorf65A6NEN9 183 aa8.21□□□□□ -1.1
SRRT-211ENST00000478693 FBLL1A6NHQ2 334 aaKnown RBP8.21□□□□□ -1.1
SRRT-211ENST00000478693 CCL20P78556 96 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms