RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
CCM2-209ENST00000477605 CKS2P33552 79 aa14.05□□□□□ -0.16
CCM2-209ENST00000477605 Q6ZVH6 145 aa14.05□□□□□ -0.16
CCM2-209ENST00000477605 LOC389332A0A1B0GUA5 103 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 LINC01546A6NGU7 62 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 NCR2O95944 276 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 TWIST1Q15672 202 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 VAMP3Q15836 100 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 ZNF502Q8TBZ5 544 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 VGLL1Q99990 258 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 SIRPDQ9H106 197 aa14.04□□□□□ -0.16
CCM2-209ENST00000477605 MUC21A0A0G2JKD1 596 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 MUC21A0A140T8X8 626 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 IGHV3-23P01764 117 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 FAM106AQ4KMX7 169 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 MUC21Q5SSG8 566 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 OR4C5Q8NGB2 326 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 SLC50A1Q9BRV3 221 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 UBR5O95071 2799 aaPredicted RBP14.03□□□□□ -0.16
CCM2-209ENST00000477605 ZNF80P51504 273 aaPredicted RBP14.03□□□□□ -0.16
CCM2-209ENST00000477605 SEC11AP67812 179 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 LOXL1Q08397 574 aaPredicted RBP14.03□□□□□ -0.16
CCM2-209ENST00000477605 C2orf91Q6ZV80 131 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 OR8A1Q8NGG7 326 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 TP73-AS1Q9UF72 201 aa14.03□□□□□ -0.16
CCM2-209ENST00000477605 PCNX1Q96RV3 2341 aa14.02□□□□□ -0.16
CCM2-209ENST00000477605 LINC01559Q495D7 138 aa14.02□□□□□ -0.16
CCM2-209ENST00000477605 SIVA1O15304 175 aa14.02□□□□□ -0.17
CCM2-209ENST00000477605 GOSR1O95249 250 aa14.02□□□□□ -0.17
CCM2-209ENST00000477605 UBE2E1P51965 193 aa14.02□□□□□ -0.17
CCM2-209ENST00000477605 PSMG3-AS1Q96PY0 264 aa14.02□□□□□ -0.17
CCM2-209ENST00000477605 BUB3O43684 328 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 ZFP36P26651 326 aaKnown RBP14.01□□□□□ -0.17
CCM2-209ENST00000477605 CDSNQ15517 529 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 ZNF575Q86XF7 245 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 Q8TAT8 98 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 IFI27L1Q96BM0 104 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 MRPL53Q96EL3 112 aaKnown RBP14.01□□□□□ -0.17
CCM2-209ENST00000477605 MAP1LC3AQ9H492 121 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 ZFAND3Q9H8U3 227 aa14.01□□□□□ -0.17
CCM2-209ENST00000477605 NPYP01303 97 aa14□□□□□ -0.17
CCM2-209ENST00000477605 ORM1P02763 201 aa14□□□□□ -0.17
CCM2-209ENST00000477605 PRB4P10163 310 aaPredicted RBP14□□□□□ -0.17
CCM2-209ENST00000477605 FGF6P10767 208 aa14□□□□□ -0.17
CCM2-209ENST00000477605 OR9G4Q8NGQ1 327 aa14□□□□□ -0.17
CCM2-209ENST00000477605 ABCA1O95477 2261 aa14□□□□□ -0.17
CCM2-209ENST00000477605 C15orf32Q32M92 178 aa14□□□□□ -0.17
CCM2-209ENST00000477605 TMEM97Q5BJF2 176 aa14□□□□□ -0.17
CCM2-209ENST00000477605 BOD1L2Q8IYS8 172 aa14□□□□□ -0.17
CCM2-209ENST00000477605 POLEQ07864 2286 aa14□□□□□ -0.17
CCM2-209ENST00000477605 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
CCM2-209ENST00000477605 PIFOQ8TCI5 191 aa13.99□□□□□ -0.17
CCM2-209ENST00000477605 RNF185Q96GF1 192 aa13.99□□□□□ -0.17
CCM2-209ENST00000477605 NXT2Q9NPJ8 142 aaKnown RBP13.99□□□□□ -0.17
CCM2-209ENST00000477605 HIF1ANQ9NWT6 349 aa13.99□□□□□ -0.17
CCM2-209ENST00000477605 ATP6V0BQ99437 205 aa13.99□□□□□ -0.17
CCM2-209ENST00000477605 PEF1Q9UBV8 284 aaKnown RBP13.99□□□□□ -0.17
CCM2-209ENST00000477605 FLNCQ14315 2725 aa13.98□□□□□ -0.17
CCM2-209ENST00000477605 CLEC3BP05452 202 aa13.98□□□□□ -0.17
CCM2-209ENST00000477605 HLA-DMBP28068 263 aa13.98□□□□□ -0.17
CCM2-209ENST00000477605 CACNG7P62955 275 aa13.98□□□□□ -0.17
CCM2-209ENST00000477605 ANKRD39Q53RE8 183 aa13.98□□□□□ -0.17
CCM2-209ENST00000477605 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.98□□□□□ -0.17
CCM2-209ENST00000477605 FLNBO75369 2602 aaKnown RBP13.97□□□□□ -0.17
CCM2-209ENST00000477605 NDUFS7O75251 213 aa13.97□□□□□ -0.17
CCM2-209ENST00000477605 TRBV7-1A0A0A6YYK4 115 aa13.97□□□□□ -0.17
CCM2-209ENST00000477605 IGFL4Q6B9Z1 124 aa13.97□□□□□ -0.17
CCM2-209ENST00000477605 EEF1AKMT3Q96AZ1 226 aa13.97□□□□□ -0.17
CCM2-209ENST00000477605 AJUBAQ96IF1 538 aa13.97□□□□□ -0.17
CCM2-209ENST00000477605 SMAD7O15105 426 aaKnown RBP13.96□□□□□ -0.17
CCM2-209ENST00000477605 FCER1GP30273 86 aa13.96□□□□□ -0.17
CCM2-209ENST00000477605 OR4X2Q8NGF9 303 aa13.96□□□□□ -0.17
CCM2-209ENST00000477605 RNASE8Q8TDE3 154 aaKnown RBP13.96□□□□□ -0.17
CCM2-209ENST00000477605 SMKR1H3BMG3 65 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 ATP6V0E1O15342 81 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 ASH1LQ9NR48 2969 aaKnown RBP13.95□□□□□ -0.18
CCM2-209ENST00000477605 CLPSL1A2RUU4 121 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 A6NDN8 102 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 CBY3A6NI87 242 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 UQCRFS1P47985 274 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 HSD52Q0P140 79 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 ERCC8Q13216 396 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 ECSCRQ19T08 205 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 PRSS57Q6UWY2 283 aa13.95□□□□□ -0.18
CCM2-209ENST00000477605 A1L4Q6 167 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 PRAC2D3DTV9 90 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 RBX1P62877 108 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 TNFRSF6BO95407 300 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 GNLYP22749 145 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 CDKN1BP46527 198 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 EFNA4P52798 201 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 SRSF1Q07955 248 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCM2-209ENST00000477605 AMMECR1LQ6DCA0 310 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 CCDC140Q96MF4 163 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 METTL26Q96S19 204 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 MSRB1Q9NZV6 116 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 U3KQE9 123 aa13.94□□□□□ -0.18
CCM2-209ENST00000477605 COL12A1Q99715 3063 aa13.93□□□□□ -0.18
CCM2-209ENST00000477605 C7orf71A4D174 169 aa13.93□□□□□ -0.18
CCM2-209ENST00000477605 PRSS47A8MTI9 375 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms