RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 IGHG2P01859 326 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 SLC25A16P16260 332 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 ARL3P36405 182 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 ERCC8Q13216 396 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 Q6AWC8 147 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 Q8N976 141 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 BORCS7Q96B45 105 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 ATP6V0BQ99437 205 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 SLC50A1Q9BRV3 221 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 U3KQE9 123 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 PDZD2O15018 2839 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 SETXQ7Z333 2677 aaKnown RBP8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 KIR2DL5BA0A0G2JN68 375 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 KIR2DL5BA0A0G2JPC4 375 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 M0QZK8 103 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 M0R2Z0 102 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 BLCAPP62952 87 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 TDRG1Q3Y452 100 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 KIR2DL5AQ8N109 375 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 URB1-AS1Q96HZ7 61 aa8.48□□□□□ -1.05
HLA-DMB-260ENST00000477537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 A0A1B0GW15 77 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 M0QZ24 198 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 TRBV12-3P01733 135 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 Q6ZS46 218 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 GATD1Q8NB37 220 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 NDFIP1Q9BT67 221 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 NDUFAF3Q9BU61 184 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
HLA-DMB-260ENST00000477537 TRAV8-2A0A0B4J237 113 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 H3BUA1 57 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 PF4V1P10720 104 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 FOSL1P15407 271 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 GATA3P23771 443 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 PPIFP30405 207 aaKnown RBP8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 BMI1P35226 326 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 LYZL1Q6UWQ5 148 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 C8orf86Q6ZUL3 223 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 LINC01356Q8N9X3 169 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 VAMP8Q9BV40 100 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 CELSR1Q9NYQ6 3014 aa8.46□□□□□ -1.05
HLA-DMB-260ENST00000477537 RBAKDNA6NC62 111 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 FAM181BA6NEQ2 426 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 SSTP61278 116 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 KLK15Q9H2R5 256 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 PAM16Q9Y3D7 125 aa8.46□□□□□ -1.06
HLA-DMB-260ENST00000477537 ZANQ9Y493 2812 aa8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 BRI3O95415 125 aa8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 RPS20P60866 119 aaKnown RBP8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 UNQ9165/PRO28630Q6UXU0 137 aa8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 IL17RELQ6ZVW7 336 aa8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
HLA-DMB-260ENST00000477537 A0A096LNT2 108 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 MUC21A0A0G2JKD1 596 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 MUC21A0A140T8X8 626 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 TMEM213A2RRL7 107 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 NDUFA4O00483 81 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 ORM1P02763 201 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 MUC21Q5SSG8 566 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 LCNL1Q6ZST4 164 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 GLMPQ8WWB7 406 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 C20orf144Q9BQM9 153 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 FABP5P3A8MUU1 101 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 SMAD7O15105 426 aaKnown RBP8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 EBLN2Q6P2I7 272 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 ZNF493Q6ZR52 646 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 FER1L6-AS1Q8NA97 138 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 MAPK1IP1LQ8NDC0 245 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 OR4X2Q8NGF9 303 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 C16orf92Q96LL3 132 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 CLEC5AQ9NY25 188 aa8.44□□□□□ -1.06
HLA-DMB-260ENST00000477537 TGFAP01135 160 aa8.43□□□□□ -1.06
HLA-DMB-260ENST00000477537 IGHV4-59P01825 116 aa8.43□□□□□ -1.06
HLA-DMB-260ENST00000477537 LINC00614P0C842 121 aa8.43□□□□□ -1.06
HLA-DMB-260ENST00000477537 ZNF138P52744 262 aa8.43□□□□□ -1.06
HLA-DMB-260ENST00000477537 DEFB112Q30KQ8 113 aa8.43□□□□□ -1.06
HLA-DMB-260ENST00000477537 IGHV1-24A0A0C4DH33 117 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 CSN3P07498 182 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 IGLC6P0CF74 106 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 BTF3P20290 206 aaKnown RBP8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 CTRLP40313 264 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 A0A0G2JLM5 398 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 J3QLI3 93 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 CFHR3Q02985 330 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 ZNF705AQ6ZN79 300 aaPredicted RBP8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 C9orf139Q6ZV77 190 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms