RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 VAMP8Q9BV40 100 aa12.02□□□□□ -0.49
LINC00996-201ENST00000477392 EBLN2Q6P2I7 272 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 UNQ9165/PRO28630Q6UXU0 137 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
LINC00996-201ENST00000477392 KLK15Q9H2R5 256 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 PAM16Q9Y3D7 125 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 ANKRD17O75179 2603 aaKnown RBP12.01□□□□□ -0.49
LINC00996-201ENST00000477392 TMEM213A2RRL7 107 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 COX6B1P14854 86 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 BMI1P35226 326 aa12.01□□□□□ -0.49
LINC00996-201ENST00000477392 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
LINC00996-201ENST00000477392 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
LINC00996-201ENST00000477392 FAM208BQ5VWN6 2430 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 FBN2P35556 2912 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 C2orf70A6NJV1 201 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 NDUFA4O00483 81 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 IGLC6P0CF74 106 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 CTRLP40313 264 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 SRSF2Q01130 221 aaKnown RBP12□□□□□ -0.49
LINC00996-201ENST00000477392 CFHR3Q02985 330 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 PMCHL1Q16048 86 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 LINC01356Q8N9X3 169 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 USMG5Q96IX5 58 aa12□□□□□ -0.49
LINC00996-201ENST00000477392 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
LINC00996-201ENST00000477392 IGHV1-24A0A0C4DH33 117 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
LINC00996-201ENST00000477392 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 IGHV3-11P01762 117 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
LINC00996-201ENST00000477392 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 LRRK2Q5S007 2527 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 A1L4Q6 167 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 LCNL1Q6ZST4 164 aa11.99□□□□□ -0.49
LINC00996-201ENST00000477392 LINC00614P0C842 121 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 PF4V1P10720 104 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 MUC21A0A0G2JKD1 596 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 MUC21A0A140T8X8 626 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 FABP5P3A8MUU1 101 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 EREGO14944 169 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 ZNF138P52744 262 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 MUC21Q5SSG8 566 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 SPATA12Q7Z6I5 190 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 GPHB5Q86YW7 130 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 LURAP1LQ8IV03 231 aa11.98□□□□□ -0.49
LINC00996-201ENST00000477392 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 BTF3P20290 206 aaKnown RBP11.97□□□□□ -0.49
LINC00996-201ENST00000477392 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 MAPK1IP1LQ8NDC0 245 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 OR4X2Q8NGF9 303 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 U3KQK5 164 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 POLQO75417 2590 aa11.97□□□□□ -0.49
LINC00996-201ENST00000477392 CR1P17927 2039 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 ORM1P02763 201 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 SSTP61278 116 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 FAM104BQ5XKR9 115 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 LINC00173Q6ZV60 143 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 C20orf173Q96LM9 149 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 ZNF580Q9UK33 172 aa11.96□□□□□ -0.49
LINC00996-201ENST00000477392 CSN3P07498 182 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 C9orf47Q6ZRZ4 202 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 AMN1Q8IY45 258 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 C16orf92Q96LL3 132 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 C11orf21Q9P2W6 132 aa11.96□□□□□ -0.5
LINC00996-201ENST00000477392 USP9YO00507 2555 aaPredicted RBP11.95□□□□□ -0.5
LINC00996-201ENST00000477392 J3QLI3 93 aa11.95□□□□□ -0.5
LINC00996-201ENST00000477392 SOCS3O14543 225 aa11.95□□□□□ -0.5
LINC00996-201ENST00000477392 SPATA45Q537H7 98 aa11.95□□□□□ -0.5
LINC00996-201ENST00000477392 TMEM78Q5T7P6 136 aa11.95□□□□□ -0.5
LINC00996-201ENST00000477392 CNFNQ9BYD5 112 aa11.95□□□□□ -0.5
LINC00996-201ENST00000477392 CSMD2Q7Z408 3487 aa11.95□□□□□ -0.5
LINC00996-201ENST00000477392 D6R8Y8 96 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 ATOH7Q8N100 152 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 SNHG12Q9BXW3 62 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 NPFFR1Q9GZQ6 430 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 TGFAP01135 160 aa11.94□□□□□ -0.5
LINC00996-201ENST00000477392 MRPL51Q4U2R6 128 aaKnown RBP11.94□□□□□ -0.5
LINC00996-201ENST00000477392 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
LINC00996-201ENST00000477392 RAB4AP20338 218 aa11.93□□□□□ -0.5
LINC00996-201ENST00000477392 HIST1H1AQ02539 215 aaPredicted RBP11.93□□□□□ -0.5
LINC00996-201ENST00000477392 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
LINC00996-201ENST00000477392 LBHQ53QV2 105 aaPredicted RBP11.93□□□□□ -0.5
LINC00996-201ENST00000477392 ZNF705AQ6ZN79 300 aaPredicted RBP11.93□□□□□ -0.5
LINC00996-201ENST00000477392 TMEM70Q9BUB7 260 aa11.93□□□□□ -0.5
LINC00996-201ENST00000477392 A0A1B0GV90 55 aa11.93□□□□□ -0.5
LINC00996-201ENST00000477392 RNF223E7ERA6 249 aa11.93□□□□□ -0.5
LINC00996-201ENST00000477392 CRXO43186 299 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms