RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 Q6ZQT7 251 aa11.53□□□□□ -0.56
COPS3-207ENST00000477299 C9orf47Q6ZRZ4 202 aa11.53□□□□□ -0.56
COPS3-207ENST00000477299 GOLT1AQ6ZVE7 132 aa11.53□□□□□ -0.56
COPS3-207ENST00000477299 C1orf158Q8N1D5 194 aa11.53□□□□□ -0.56
COPS3-207ENST00000477299 Q8TAT8 98 aa11.53□□□□□ -0.56
COPS3-207ENST00000477299 ZMAT4Q9H898 229 aa11.53□□□□□ -0.56
COPS3-207ENST00000477299 CSN1S1P47710 185 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 RXFP4Q8TDU9 374 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 FAM19A4Q96LR4 140 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 LINC00479Q96M42 142 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 PPP1R14DQ9NXH3 145 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 EPDR1Q9UM22 224 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 U3KQK5 164 aa11.52□□□□□ -0.57
COPS3-207ENST00000477299 IGHV3OR16-12A0A075B7B8 117 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 TCRAP04437 139 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 NUTF2P61970 127 aaKnown RBP11.51□□□□□ -0.57
COPS3-207ENST00000477299 PRR9Q5T870 116 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 CST9LP1Q5W188 147 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 CCDC28AQ8IWP9 274 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 CMTM2Q8TAZ6 248 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 TVP23CQ96ET8 276 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 X6R8D5 127 aa11.51□□□□□ -0.57
COPS3-207ENST00000477299 TRAV34A0A0B4J273 112 aa11.5□□□□□ -0.57
COPS3-207ENST00000477299 DEFB4AO15263 64 aa11.5□□□□□ -0.57
COPS3-207ENST00000477299 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
COPS3-207ENST00000477299 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
COPS3-207ENST00000477299 RARRES2Q99969 163 aa11.5□□□□□ -0.57
COPS3-207ENST00000477299 ZNF492Q9P255 531 aa11.5□□□□□ -0.57
COPS3-207ENST00000477299 IFNA7P01567 189 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 ZNF138P52744 262 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 GFI1BQ5VTD9 330 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 TEX261Q6UWH6 196 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 ZFAND2AQ8N6M9 145 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 IGF2BP2-AS1Q96M15 143 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 TP53TG1Q9Y2A0 90 aa11.49□□□□□ -0.57
COPS3-207ENST00000477299 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
COPS3-207ENST00000477299 CDKN1BP46527 198 aa11.48□□□□□ -0.57
COPS3-207ENST00000477299 BTN1A1Q13410 526 aa11.48□□□□□ -0.57
COPS3-207ENST00000477299 ZNF705AQ6ZN79 300 aaPredicted RBP11.48□□□□□ -0.57
COPS3-207ENST00000477299 ZNF680Q8NEM1 530 aa11.48□□□□□ -0.57
COPS3-207ENST00000477299 C1QTNF4Q9BXJ3 329 aa11.48□□□□□ -0.57
COPS3-207ENST00000477299 TRAV12-3A0A0B4J271 114 aa11.47□□□□□ -0.57
COPS3-207ENST00000477299 RNASE4P34096 147 aaKnown RBP11.47□□□□□ -0.57
COPS3-207ENST00000477299 STAB2Q8WWQ8 2551 aa11.47□□□□□ -0.57
COPS3-207ENST00000477299 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 ZNF705GA8MUZ8 300 aaPredicted RBP11.46□□□□□ -0.57
COPS3-207ENST00000477299 KLLNB2CW77 178 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 PEX7O00628 323 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 HBE1P02100 147 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 LEPP41159 167 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 BLOC1S1P78537 153 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 C8orf49Q96NF6 230 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 EDA2RQ9HAV5 297 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 PSG8Q9UQ74 426 aa11.46□□□□□ -0.57
COPS3-207ENST00000477299 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 C11orf94C9JXX5 98 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 TEX46H3BTG2 121 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 INSP01308 110 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 GPX1P07203 203 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 CRISP2P16562 243 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 AZU1P20160 251 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 TSPOP30536 169 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 PRNTQ86SH4 94 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 CYB561D1Q8N8Q1 229 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 Q8NAQ8 132 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 ATG101Q9BSB4 218 aa11.45□□□□□ -0.58
COPS3-207ENST00000477299 F6UZH7 168 aa11.44□□□□□ -0.58
COPS3-207ENST00000477299 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
COPS3-207ENST00000477299 AMBPP02760 352 aa11.44□□□□□ -0.58
COPS3-207ENST00000477299 HTN1P15515 57 aa11.44□□□□□ -0.58
COPS3-207ENST00000477299 FLI1Q01543 452 aaPredicted RBP11.44□□□□□ -0.58
COPS3-207ENST00000477299 IFITM2Q01629 132 aa11.44□□□□□ -0.58
COPS3-207ENST00000477299 LINC01587Q99440 93 aa11.44□□□□□ -0.58
COPS3-207ENST00000477299 NKX6-2Q9C056 277 aaPredicted RBP11.44□□□□□ -0.58
COPS3-207ENST00000477299 GOLT1BQ9Y3E0 138 aa11.44□□□□□ -0.58
COPS3-207ENST00000477299 C7orf71A4D174 169 aa11.43□□□□□ -0.58
COPS3-207ENST00000477299 ZNF80P51504 273 aaPredicted RBP11.43□□□□□ -0.58
COPS3-207ENST00000477299 TMEM75Q8N9X5 138 aa11.43□□□□□ -0.58
COPS3-207ENST00000477299 TMEM208Q9BTX3 173 aa11.43□□□□□ -0.58
COPS3-207ENST00000477299 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
COPS3-207ENST00000477299 PPT1P50897 306 aa11.42□□□□□ -0.58
COPS3-207ENST00000477299 C2CD4CQ8TF44 421 aa11.42□□□□□ -0.58
COPS3-207ENST00000477299 DERL1Q9BUN8 251 aa11.42□□□□□ -0.58
COPS3-207ENST00000477299 TREM1Q9NP99 234 aa11.42□□□□□ -0.58
COPS3-207ENST00000477299 MANBALQ9NQG1 85 aa11.42□□□□□ -0.58
COPS3-207ENST00000477299 DNAH7Q8WXX0 4024 aa11.42□□□□□ -0.58
COPS3-207ENST00000477299 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
COPS3-207ENST00000477299 NMBP08949 121 aa11.41□□□□□ -0.58
COPS3-207ENST00000477299 BCL2P10415 239 aa11.41□□□□□ -0.58
COPS3-207ENST00000477299 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
COPS3-207ENST00000477299 HIST1H2BAQ96A08 127 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms