RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PFDN5Q99471 154 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 PYGO2Q9BRQ0 406 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 LINC00588Q9Y4M8 146 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 PMS2P5A8MQ11 134 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 RRAS2P62070 204 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-214ENST00000477152 SLAQ13239 276 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 C10orf113Q5VZT2 155 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 RNASE8Q8TDE3 154 aaKnown RBP5.06□□□□□ -1.6
BRCA1-214ENST00000477152 UPK3BQ9BT76 320 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 C20orf85Q9H1P6 137 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 ZNF331Q9NQX6 463 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-214ENST00000477152 PRELID1Q9Y255 219 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 HECTD4Q9Y4D8 3996 aa5.06□□□□□ -1.6
BRCA1-214ENST00000477152 TRAV9-2A0A087WT02 112 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 TRAV26-1A0A087WT03 109 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 H3BMQ9 156 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 METTL15P1P0C7V9 234 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 AZU1P20160 251 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 FCN2Q15485 313 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 IAH1Q2TAA2 248 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-214ENST00000477152 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 TMEM14EPQ6UXP3 125 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-214ENST00000477152 PRSS3P2Q8NHM4 247 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 UHRF2Q96PU4 802 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 Q9H3A6 140 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 MRPS16Q9Y3D3 137 aaKnown RBP5.05□□□□□ -1.6
BRCA1-214ENST00000477152 TRGV2A0A075B6R0 118 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 ZNF701M0R085 212 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-214ENST00000477152 AGPAT2O15120 278 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 ZNF253O75346 499 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 GAGE7O76087 117 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 NDUFB6O95139 128 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 SLC25A5P05141 298 aaKnown RBP5.05□□□□□ -1.6
BRCA1-214ENST00000477152 OR4E1P0C645 316 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 GAGE12FP0CL80 117 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 GAGE12GP0CL81 117 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 GAGE12IP0CL82 117 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 BCAP31P51572 246 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 SPATA12Q7Z6I5 190 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 NFE4Q86UQ8 179 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 MRPL53Q96EL3 112 aaKnown RBP5.05□□□□□ -1.6
BRCA1-214ENST00000477152 DNAJC4Q9NNZ3 241 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
BRCA1-214ENST00000477152 PLAC8L1A1L4L8 177 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 CAMLGP49069 296 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 SLC38A11Q08AI6 406 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 DAZ2Q13117 558 aaKnown RBP5.04□□□□□ -1.6
BRCA1-214ENST00000477152 LINC00477Q96M19 166 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 C11orf21Q9P2W6 132 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 K7EP13 123 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 HIST1H1EP10412 219 aaKnown RBP5.04□□□□□ -1.6
BRCA1-214ENST00000477152 HBG1P69891 147 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 HBG2P69892 147 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 LINC00612Q8N6U2 182 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 C17orf77Q96MU5 243 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 TIMM9Q9Y5J7 89 aa5.04□□□□□ -1.6
BRCA1-214ENST00000477152 A0A0J9YY99 117 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 IFNA5P01569 189 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 PRM2P04554 102 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 NMBP08949 121 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 ERVFC1-1P60608 527 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 ATP6V1FQ16864 119 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 GFI1BQ5VTD9 330 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 PATE2Q6UY27 113 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 STX12Q86Y82 276 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 EIF4E3Q8N5X7 224 aaKnown RBP5.03□□□□□ -1.6
BRCA1-214ENST00000477152 C18orf15Q96N68 181 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 SCRT2Q9NQ03 307 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 ICOSQ9Y6W8 199 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 V9GYH0 126 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 KIAA1109Q2LD37 5005 aa5.03□□□□□ -1.6
BRCA1-214ENST00000477152 TRAV12-3A0A0B4J271 114 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 C7orf71A4D174 169 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 MRPS12O15235 138 aaKnown RBP5.02□□□□□ -1.61
BRCA1-214ENST00000477152 SIVA1O15304 175 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 MPDU1O75352 247 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 S100A11P31949 105 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 CAV2P51636 162 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 PDE6HQ13956 83 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 TMEM78Q5T7P6 136 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 MITD1Q8WV92 249 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 LINC00467Q9BRT7 94 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 KCNIP2Q9NS61 270 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 UQCC1Q9NVA1 299 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 DNAH17Q9UFH2 4485 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 C5orf51A6NDU8 294 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 GPX1P07203 203 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 IGLC2P0DOY2 106 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 RPL29P47914 159 aaKnown RBP5.02□□□□□ -1.61
BRCA1-214ENST00000477152 ESRGQ1W209 222 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 NRARPQ7Z6K4 114 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 PCNPQ8WW12 178 aaKnown RBP5.02□□□□□ -1.61
BRCA1-214ENST00000477152 ZNF586Q9NXT0 402 aa5.02□□□□□ -1.61
BRCA1-214ENST00000477152 RCL1Q9Y2P8 373 aaKnown RBP5.02□□□□□ -1.61
BRCA1-214ENST00000477152 TRGV1A0A0A0MS02 117 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 C7orf66A4D0T2 115 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 FAM25EA8MYX2 175 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms