RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 FXYD5Q96DB9 178 aa15.03■□□□□ -0
LIMK1-204ENST00000476792 LINC00477Q96M19 166 aa15.03■□□□□ -0
LIMK1-204ENST00000476792 GAGE12BA1L429 117 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 C7orf71A4D174 169 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 SNURFLB1AK76 121 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 GAGE7O76087 117 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 SLC25A5P05141 298 aaKnown RBP15.02■□□□□ -0
LIMK1-204ENST00000476792 GAGE12FP0CL80 117 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 GAGE12GP0CL81 117 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 GAGE12IP0CL82 117 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 CD300CQ08708 224 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 BTN1A1Q13410 526 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 RNF212Q495C1 297 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 PHYHIPLQ96FC7 376 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 VGLL1Q99990 258 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 ATG101Q9BSB4 218 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 ALG5Q9Y673 324 aa15.02■□□□□ -0
LIMK1-204ENST00000476792 EIF3GO75821 320 aaKnown RBP eCLIP15.01□□□□□ -0.01
LIMK1-204ENST00000476792 PYGO2Q9BRQ0 406 aa15.01□□□□□ -0.01
LIMK1-204ENST00000476792 WFDC1Q9HC57 220 aa15.01□□□□□ -0.01
LIMK1-204ENST00000476792 DNAH6Q9C0G6 4158 aa15□□□□□ -0.01
LIMK1-204ENST00000476792 GPX1P07203 203 aa15□□□□□ -0.01
LIMK1-204ENST00000476792 RANP62826 216 aaKnown RBP15□□□□□ -0.01
LIMK1-204ENST00000476792 OR5I1Q13606 314 aa15□□□□□ -0.01
LIMK1-204ENST00000476792 TMEM78Q5T7P6 136 aa15□□□□□ -0.01
LIMK1-204ENST00000476792 FRAS1Q86XX4 4008 aa15□□□□□ -0.01
LIMK1-204ENST00000476792 KLLNB2CW77 178 aa14.99□□□□□ -0.01
LIMK1-204ENST00000476792 UBE2L3P68036 154 aaKnown RBP14.99□□□□□ -0.01
LIMK1-204ENST00000476792 LGALS9BQ3B8N2 356 aa14.99□□□□□ -0.01
LIMK1-204ENST00000476792 C9orf47Q6ZRZ4 202 aa14.99□□□□□ -0.01
LIMK1-204ENST00000476792 ZNF503Q96F45 646 aa14.99□□□□□ -0.01
LIMK1-204ENST00000476792 FAM19A4Q96LR4 140 aa14.99□□□□□ -0.01
LIMK1-204ENST00000476792 NACAE9PAV3 2078 aa14.99□□□□□ -0.01
LIMK1-204ENST00000476792 LINC00336Q6ZUF6 198 aa14.98□□□□□ -0.01
LIMK1-204ENST00000476792 GSN-AS1Q9NRJ2 163 aa14.98□□□□□ -0.01
LIMK1-204ENST00000476792 CSN1S1P47710 185 aa14.97□□□□□ -0.01
LIMK1-204ENST00000476792 LINC00612Q8N6U2 182 aa14.97□□□□□ -0.01
LIMK1-204ENST00000476792 Q8TAT8 98 aa14.97□□□□□ -0.01
LIMK1-204ENST00000476792 Q9H3A6 140 aa14.97□□□□□ -0.01
LIMK1-204ENST00000476792 ZNF492Q9P255 531 aa14.97□□□□□ -0.01
LIMK1-204ENST00000476792 RTL8CO15255 209 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 ZNF324O75467 553 aaPredicted RBP14.96□□□□□ -0.01
LIMK1-204ENST00000476792 CRISP2P16562 243 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 KHDC3LQ587J8 217 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 PRR9Q5T870 116 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 Q6ZQT7 251 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 Q6ZTI0 123 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 ZFAND2AQ8N6M9 145 aa14.96□□□□□ -0.01
LIMK1-204ENST00000476792 TRAV26-1A0A087WT03 109 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 A0A0J9YY99 117 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 PRSS29PA6NIE9 313 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 ZNF138P52744 262 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 TAS2R45P59539 299 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 Q6ZR54 194 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 EIF4E3Q8N5X7 224 aaKnown RBP14.95□□□□□ -0.02
LIMK1-204ENST00000476792 MED28Q9H204 178 aa14.95□□□□□ -0.02
LIMK1-204ENST00000476792 RGS13O14921 159 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 PTTG1O95997 202 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 HOXA5P20719 270 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 DAZ2Q13117 558 aaKnown RBP14.94□□□□□ -0.02
LIMK1-204ENST00000476792 ACOT6Q3I5F7 207 aaPredicted RBP14.94□□□□□ -0.02
LIMK1-204ENST00000476792 C11orf72Q8NBR9 251 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 ZNF680Q8NEM1 530 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 GNPNAT1Q96EK6 184 aaPredicted RBP14.94□□□□□ -0.02
LIMK1-204ENST00000476792 HYLS1Q96M11 299 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 TMPRSS5Q9H3S3 457 aa14.94□□□□□ -0.02
LIMK1-204ENST00000476792 TRGV1A0A0A0MS02 117 aa14.93□□□□□ -0.02
LIMK1-204ENST00000476792 CCL18P55774 89 aa14.93□□□□□ -0.02
LIMK1-204ENST00000476792 RAB2AP61019 212 aa14.93□□□□□ -0.02
LIMK1-204ENST00000476792 TP53TG3Q9ULZ0 132 aa14.93□□□□□ -0.02
LIMK1-204ENST00000476792 RPH3ALQ9UNE2 315 aa14.93□□□□□ -0.02
LIMK1-204ENST00000476792 KLF12Q9Y4X4 402 aa14.93□□□□□ -0.02
LIMK1-204ENST00000476792 TRGV2A0A075B6R0 118 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 A0A1W2PPV4 95 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 HMGB3O15347 200 aaKnown RBP14.92□□□□□ -0.02
LIMK1-204ENST00000476792 NMBP08949 121 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 M6PRP20645 277 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 FAM3BP58499 235 aaPredicted RBP14.92□□□□□ -0.02
LIMK1-204ENST00000476792 ANXA2RQ3ZCQ2 193 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 LINC00467Q9BRT7 94 aa14.92□□□□□ -0.02
LIMK1-204ENST00000476792 LINC00588Q9Y4M8 146 aa14.91□□□□□ -0.02
LIMK1-204ENST00000476792 IGHV1OR15-1A0A075B7D0 117 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 HSD17B11Q8NBQ5 300 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 OR10G4Q8NGN3 311 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 OR10G9Q8NGN4 311 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 OR10G7Q8NGN6 311 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 ZNRF2Q8NHG8 242 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 RXFP4Q8TDU9 374 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 ARPC5LQ9BPX5 153 aa14.9□□□□□ -0.02
LIMK1-204ENST00000476792 A0A1B0GVY2 172 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 RBAKDNA6NC62 111 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 PGPA6NDG6 321 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 DIRC3C9JPN6 131 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 TCL1AP56279 114 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 SOHLH1Q5JUK2 328 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 MUC21Q5SSG8 566 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 C1orf134Q5TEV5 83 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 SSX7Q7RTT5 188 aa14.89□□□□□ -0.03
LIMK1-204ENST00000476792 CMTM2Q8TAZ6 248 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms