RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 GPR183P32249 361 aa12.43□□□□□ -0.42
VARS2-207ENST00000476162 HBBP68871 147 aa12.43□□□□□ -0.42
VARS2-207ENST00000476162 PAX8Q06710 450 aa12.43□□□□□ -0.42
VARS2-207ENST00000476162 CCL19Q99731 98 aa12.43□□□□□ -0.42
VARS2-207ENST00000476162 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
VARS2-207ENST00000476162 AAMDCQ9H7C9 122 aa12.43□□□□□ -0.42
VARS2-207ENST00000476162 SYS1-DBNDD2H3BUS1 97 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 K7EP34 96 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 SEC11AP67812 179 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 RBPMS2Q6ZRY4 209 aaKnown RBP12.42□□□□□ -0.42
VARS2-207ENST00000476162 URB1-AS1Q96HZ7 61 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 RABAC1Q9UI14 185 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 C9orf118A6NHY6 69 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 ZNF502Q8TBZ5 544 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 ATP6V0BQ99437 205 aa12.42□□□□□ -0.42
VARS2-207ENST00000476162 ABCA2Q9BZC7 2435 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 CLEC3BP05452 202 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 RPL7P18124 248 aaKnown RBP12.41□□□□□ -0.42
VARS2-207ENST00000476162 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 PIMREGQ9BSJ6 248 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 MS4A6AQ9H2W1 248 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
VARS2-207ENST00000476162 ZFHX3Q15911 3703 aa12.41□□□□□ -0.42
VARS2-207ENST00000476162 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 H3BRM9 83 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 CRIP1P50238 77 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 FOXE3Q13461 319 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 KLK9Q2XQG4 91 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 BRD3OSQ6XYD6 125 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 C2orf91Q6ZV80 131 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 SIGMAR1Q99720 223 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 KLK9Q9UKQ9 250 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 SELENOKQ9Y6D0 94 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 SMAD5-AS1Q9Y6J3 95 aa12.4□□□□□ -0.42
VARS2-207ENST00000476162 LINC00173Q6ZV60 143 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 TMEM191AQ9H0A3 160 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 CELSR1Q9NYQ6 3014 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 IGHV1-69DA0A0B4J2H0 117 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 IGHV1-69P01742 117 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 CSN1S1P47710 185 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 TMEM97Q5BJF2 176 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 C8orf49Q96NF6 230 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 AP1S3Q96PC3 154 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 GTSF1LQ9H1H1 148 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 SPG11Q96JI7 2443 aa12.39□□□□□ -0.43
VARS2-207ENST00000476162 TMEM8BA6NDV4 472 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 FLNCQ14315 2725 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 IGKV2-40A0A087WW87 121 aaPredicted RBP12.38□□□□□ -0.43
VARS2-207ENST00000476162 IGKV2D-40P01614 121 aaPredicted RBP12.38□□□□□ -0.43
VARS2-207ENST00000476162 ATP5J2P56134 94 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 IGFL4Q6B9Z1 124 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 PIFOQ8TCI5 191 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 ZFAND3Q9H8U3 227 aa12.38□□□□□ -0.43
VARS2-207ENST00000476162 ACACBO00763 2458 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
VARS2-207ENST00000476162 FOXA3P55318 350 aaPredicted RBP12.37□□□□□ -0.43
VARS2-207ENST00000476162 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 H3BUT2 72 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 COX8AP10176 69 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 FAM162BQ5T6X4 162 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 PMCHL2Q9BQD1 86 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
VARS2-207ENST00000476162 SERTM2A0A1B0GWG4 89 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 A6NJY4 79 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 HAX1O00165 279 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 OR5A1Q8NGJ0 315 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
VARS2-207ENST00000476162 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
VARS2-207ENST00000476162 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 CHEK1O14757 476 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 IGHG4P01861 327 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 CT45A10P0DMU9 189 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 RAB9AP51151 201 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 HSD52Q0P140 79 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 EEF1AKMT3Q96AZ1 226 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 LINC00527Q9UJ94 153 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 BUB3O43684 328 aa12.35□□□□□ -0.43
VARS2-207ENST00000476162 IGHV3-66A0A0C4DH42 116 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 A0A0G2JLM5 398 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 A0A1B0GUT8 65 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 CLPSL1A2RUU4 121 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 ARMS2P0C7Q2 107 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 A6NDN8 102 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 CHCHD1Q96BP2 118 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms