RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 SKA2Q8WVK7 121 aaPredicted RBP1.47□□□□□ -2.17
TOP2B-206ENST00000475717 AMELYQ99218 206 aa1.47□□□□□ -2.17
TOP2B-206ENST00000475717 CST11Q9H112 138 aa1.47□□□□□ -2.17
TOP2B-206ENST00000475717 C5orf58C9J3I9 102 aa1.46□□□□□ -2.18
TOP2B-206ENST00000475717 MIR22HGQ0VDD5 57 aa1.46□□□□□ -2.18
TOP2B-206ENST00000475717 TMEM35BQ8NCS4 154 aa1.46□□□□□ -2.18
TOP2B-206ENST00000475717 PLPP5Q8NEB5 264 aa1.46□□□□□ -2.18
TOP2B-206ENST00000475717 NIT2Q9NQR4 276 aa1.46□□□□□ -2.18
TOP2B-206ENST00000475717 HSPB11Q9Y547 144 aa1.46□□□□□ -2.18
TOP2B-206ENST00000475717 PHRF1Q9P1Y6 1649 aaKnown RBP1.46□□□□□ -2.18
TOP2B-206ENST00000475717 TRAV13-1A0A0B4J241 112 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 TRBV7-6A0A0J9YX20 115 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 TRBV27A0A0K0K1C4 114 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 H3BMG7 143 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 LINC00269Q8N2A0 174 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 TEX29Q8N6K0 151 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 ZDBF2Q9HCK1 2354 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 KIAA1549LQ6ZVL6 1849 aa1.45□□□□□ -2.18
TOP2B-206ENST00000475717 TPT1P13693 172 aaKnown RBP1.44□□□□□ -2.18
TOP2B-206ENST00000475717 RPS3P23396 243 aaKnown RBP eCLIP1.44□□□□□ -2.18
TOP2B-206ENST00000475717 GINS2Q9Y248 185 aa1.44□□□□□ -2.18
TOP2B-206ENST00000475717 DLC1Q96QB1 1528 aa1.44□□□□□ -2.18
TOP2B-206ENST00000475717 ATG2AQ2TAZ0 1938 aa1.44□□□□□ -2.18
TOP2B-206ENST00000475717 TCOF1Q13428 1488 aaKnown RBP1.43□□□□□ -2.18
TOP2B-206ENST00000475717 JMJD7-PLA2G4BH0Y9G9 81 aa1.43□□□□□ -2.18
TOP2B-206ENST00000475717 NCR3O14931 201 aa1.43□□□□□ -2.18
TOP2B-206ENST00000475717 PPYP01298 95 aa1.43□□□□□ -2.18
TOP2B-206ENST00000475717 IGHV3-33P01772 117 aa1.43□□□□□ -2.18
TOP2B-206ENST00000475717 TRACP01848 142 aa1.43□□□□□ -2.18
TOP2B-206ENST00000475717 MAXP61244 160 aa1.43□□□□□ -2.18
TOP2B-206ENST00000475717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
TOP2B-206ENST00000475717 LOC107984640A0A0U1RRK4 108 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 SRP9P49458 86 aaKnown RBP1.42□□□□□ -2.18
TOP2B-206ENST00000475717 AKAP14Q86UN6 197 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 TMEM229BQ8NBD8 167 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 OR5AK2Q8NH90 309 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 WFDC10AQ9H1F0 79 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 CBLN4Q9NTU7 201 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 HSPB8Q9UJY1 196 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 A2MP01023 1474 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 COL1A1P02452 1464 aaPredicted RBP1.42□□□□□ -2.18
TOP2B-206ENST00000475717 USP54Q70EL1 1684 aa1.42□□□□□ -2.18
TOP2B-206ENST00000475717 SAA1P0DJI8 122 aaPredicted RBP1.41□□□□□ -2.18
TOP2B-206ENST00000475717 FOXA3P55318 350 aaPredicted RBP1.41□□□□□ -2.18
TOP2B-206ENST00000475717 RPS28P62857 69 aaKnown RBP1.41□□□□□ -2.18
TOP2B-206ENST00000475717 ZCCHC23Q6ZST2 131 aa1.41□□□□□ -2.18
TOP2B-206ENST00000475717 MORN4Q8NDC4 146 aa1.41□□□□□ -2.18
TOP2B-206ENST00000475717 CLEC2BQ92478 149 aa1.41□□□□□ -2.18
TOP2B-206ENST00000475717 ANKRD30AQ9BXX3 1397 aa1.41□□□□□ -2.18
TOP2B-206ENST00000475717 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.4□□□□□ -2.18
TOP2B-206ENST00000475717 ARL5CA6NH57 179 aa1.4□□□□□ -2.19
TOP2B-206ENST00000475717 CRYGSP22914 178 aa1.4□□□□□ -2.19
TOP2B-206ENST00000475717 FAM135BQ49AJ0 1406 aa1.4□□□□□ -2.19
TOP2B-206ENST00000475717 VIRMAQ69YN4 1812 aaKnown RBP1.39□□□□□ -2.19
TOP2B-206ENST00000475717 TRAV23DV6A0A075B6W5 121 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.39□□□□□ -2.19
TOP2B-206ENST00000475717 C3orf85A0A1B0GTC6 90 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 EFNA4P52798 201 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 SPATA45Q537H7 98 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 GLIPR1L1Q6UWM5 242 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 CASC2Q6XLA1 102 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 NABP2Q9BQ15 211 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 FKBP11Q9NYL4 201 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 ERBINQ96RT1 1412 aa1.39□□□□□ -2.19
TOP2B-206ENST00000475717 HELZP42694 1942 aaKnown RBP1.38□□□□□ -2.19
TOP2B-206ENST00000475717 J3KT08 172 aa1.38□□□□□ -2.19
TOP2B-206ENST00000475717 M0QZK8 103 aa1.38□□□□□ -2.19
TOP2B-206ENST00000475717 RPL22P35268 128 aaKnown RBP1.38□□□□□ -2.19
TOP2B-206ENST00000475717 NAT14Q8WUY8 206 aa1.38□□□□□ -2.19
TOP2B-206ENST00000475717 LOC107986453A0A1B0GWG9 222 aa1.37□□□□□ -2.19
TOP2B-206ENST00000475717 LINC00299Q6ZSB3 139 aa1.37□□□□□ -2.19
TOP2B-206ENST00000475717 OR5A2Q8NGI9 324 aa1.37□□□□□ -2.19
TOP2B-206ENST00000475717 PYDC1Q8WXC3 89 aa1.37□□□□□ -2.19
TOP2B-206ENST00000475717 SPANXA1Q9NS26 97 aa1.37□□□□□ -2.19
TOP2B-206ENST00000475717 KNTC1P50748 2209 aa1.36□□□□□ -2.19
TOP2B-206ENST00000475717 A0A0J9YY99 117 aa1.36□□□□□ -2.19
TOP2B-206ENST00000475717 NEDD8Q15843 81 aa1.36□□□□□ -2.19
TOP2B-206ENST00000475717 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
TOP2B-206ENST00000475717 OR10AC1Q8NH08 325 aa1.36□□□□□ -2.19
TOP2B-206ENST00000475717 CIB3Q96Q77 187 aaPredicted RBP1.36□□□□□ -2.19
TOP2B-206ENST00000475717 CDK5RAP2Q96SN8 1893 aa1.35□□□□□ -2.19
TOP2B-206ENST00000475717 TRAV36DV7A0A075B6V5 113 aa1.35□□□□□ -2.19
TOP2B-206ENST00000475717 IGLV3-1P01715 115 aa1.35□□□□□ -2.19
TOP2B-206ENST00000475717 SLC25A4P12235 298 aa1.35□□□□□ -2.19
TOP2B-206ENST00000475717 LSM3P62310 102 aaKnown RBP1.35□□□□□ -2.19
TOP2B-206ENST00000475717 Q8N6K4 173 aa1.35□□□□□ -2.19
TOP2B-206ENST00000475717 C19orf12Q9NSK7 152 aa1.35□□□□□ -2.19
TOP2B-206ENST00000475717 OVOS2A0A0G2JMS6 1433 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 LOC107984156A0A0G2JMH3 177 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 A0A1B0GX51 115 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 DEGS1O15121 323 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 HBDP02042 147 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 BLCAPP62952 87 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 OR8B8Q15620 311 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 SBSPONQ8IVN8 264 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 ARL17AQ8IVW1 177 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 OR8I2Q8N0Y5 310 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 C5orf17Q8NAS9 161 aa1.34□□□□□ -2.19
TOP2B-206ENST00000475717 LIMD2Q9BT23 127 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms