RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TRAV5A0A0B4J249 113 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 MAP1LC3B2A6NCE7 125 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 SMIM9A6NGZ8 99 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 H2AFB1P0C5Y9 115 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 GALR1P47211 349 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 MEOX2P50222 304 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 DEFB1P60022 68 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 NUTF2P61970 127 aaKnown RBP9.86□□□□□ -0.83
FAM3A-218ENST00000475657 BLOC1S1P78537 153 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 SIGLEC15Q6ZMC9 328 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 SSX7Q7RTT5 188 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
FAM3A-218ENST00000475657 TRAV1-1A0A0B4J248 108 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 TEX46H3BTG2 121 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 MRPS12O15235 138 aaKnown RBP9.85□□□□□ -0.83
FAM3A-218ENST00000475657 HMGB3O15347 200 aaKnown RBP9.85□□□□□ -0.83
FAM3A-218ENST00000475657 OR7C2O60412 319 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 CXorf1O96002 111 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 IGKV3-20P01619 116 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 HBE1P02100 147 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 FXYD7P58549 80 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 LCN15Q6UWW0 184 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
FAM3A-218ENST00000475657 NIPSNAP3BQ9BS92 247 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 PAXXQ9BUH6 204 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 OR51M1Q9H341 326 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 DKK2Q9UBU2 259 aa9.85□□□□□ -0.83
FAM3A-218ENST00000475657 A0A087X0K7 114 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 RGS13O14921 159 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 ARL14EPLP0DKL9 152 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 IGLC2P0DOY2 106 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 UBE2L3P68036 154 aaKnown RBP9.84□□□□□ -0.83
FAM3A-218ENST00000475657 GUK1Q16774 197 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 SAMD13Q5VXD3 122 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 C15orf53Q8NAA6 179 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 ZNF503Q96F45 646 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 TMEM167BQ9NRX6 74 aa9.84□□□□□ -0.83
FAM3A-218ENST00000475657 ZNF705FA8MVS1 300 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-218ENST00000475657 EIF3GO75821 320 aaKnown RBP eCLIP9.83□□□□□ -0.84
FAM3A-218ENST00000475657 ZNF705DP0CH99 300 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-218ENST00000475657 ZNF705BP0CI00 300 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-218ENST00000475657 PYYP10082 97 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 HIST1H1EP10412 219 aaKnown RBP9.83□□□□□ -0.84
FAM3A-218ENST00000475657 GCHFRP30047 84 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 PDE6HQ13956 83 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 FXYD5Q96DB9 178 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 ATG101Q9BSB4 218 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 NRN1Q9NPD7 142 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
FAM3A-218ENST00000475657 ZNF253O75346 499 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 NMBP08949 121 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 OR10J4P0C629 311 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 BTF3P20290 206 aaKnown RBP9.82□□□□□ -0.84
FAM3A-218ENST00000475657 PSMB3P49720 205 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 EMP1P54849 157 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 RAB14P61106 215 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 GDF5OSQ5U4N7 250 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 LINC00052Q96N35 136 aa9.82□□□□□ -0.84
FAM3A-218ENST00000475657 TRBV19A0A075B6N1 114 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 IGHV3OR16-12A0A075B7B8 117 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 H3BMM0 161 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 H3BQ15 152 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 NBEAP1P0C6P0 100 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 PPT1P50897 306 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 FGF8P55075 233 aaPredicted RBP9.81□□□□□ -0.84
FAM3A-218ENST00000475657 SNRPD3P62318 126 aaKnown RBP9.81□□□□□ -0.84
FAM3A-218ENST00000475657 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 IQCF2Q8IXL9 164 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 C18orf15Q96N68 181 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 ZNF586Q9NXT0 402 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
FAM3A-218ENST00000475657 HTN3P15516 51 aa9.8□□□□□ -0.84
FAM3A-218ENST00000475657 CLLU1Q5K131 121 aa9.8□□□□□ -0.84
FAM3A-218ENST00000475657 C17orf77Q96MU5 243 aa9.8□□□□□ -0.84
FAM3A-218ENST00000475657 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
FAM3A-218ENST00000475657 A0A1B0GV50 99 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 SOCS3O14543 225 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 IFNA1P01562 189 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 Q5VSD8 79 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 FRZBQ92765 325 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 TMPRSS5Q9H3S3 457 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
FAM3A-218ENST00000475657 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 F6UB75 175 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 ISLRO14498 428 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 NDUFB4O95168 129 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 TAGLN2P37802 199 aaKnown RBP9.78□□□□□ -0.84
FAM3A-218ENST00000475657 PSG9Q00887 426 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 OR4B1Q8NGF8 309 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 BLNKQ8WV28 456 aa9.78□□□□□ -0.84
FAM3A-218ENST00000475657 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms