RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 NABP2Q9BQ15 211 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 METTL1Q9UBP6 276 aaKnown RBP2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 DNAJC15Q9Y5T4 150 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 RIMS1Q86UR5 1692 aaKnown RBP2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 SHROOM3Q8TF72 1996 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 CCNB3Q8WWL7 1395 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 TMEM2Q9UHN6 1383 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 COL24A1Q17RW2 1714 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 PTPRMP28827 1452 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 BCL9LQ86UU0 1499 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 TRAV10A0A0B4J240 114 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 TCRBV4S1A1TA0A5B7 111 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 FAM92AA1XBS5 289 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 MIF4GDA9UHW6 222 aaKnown RBP2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 IGF2P01344 180 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 CD3DP04234 171 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 PCBD1P61457 104 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 KRTAP13-3Q3SY46 172 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 CUL9Q8IWT3 2517 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 ERBINQ96RT1 1412 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 CDK5RAP2Q96SN8 1893 aa2.48□□□□□ -2.01
SRGAP3-205ENST00000475560 ZNF518AQ6AHZ1 1483 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 PNMA8CA0A1B0GUJ8 204 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 F8W036 122 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 CD14P08571 375 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 BRS3P32247 399 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 C2orf82Q6UX34 121 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 RPS19BP1Q86WX3 136 aaKnown RBP2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 OTOSQ8NHW6 89 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 TMEM203Q969S6 136 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 NAA38Q9BRA0 125 aaKnown RBP2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 TMEM191AQ9H0A3 160 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 CST11Q9H112 138 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 SLC35B3Q9H1N7 401 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 SOX21Q9Y651 276 aaPredicted RBP2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 CHCHD2Q9Y6H1 151 aaPredicted RBP2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 PLXNA3P51805 1871 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 FAM135AQ9P2D6 1515 aa2.47□□□□□ -2.01
SRGAP3-205ENST00000475560 RAPGEF6Q8TEU7 1601 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 RGS12O14924 1447 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 FAM25AB3EWG3 89 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 FAM25CB3EWG5 89 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 FAM25GB3EWG6 89 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 ETV6P41212 452 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 PLGLB1Q02325 96 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 WHAMMP3Q1A5X7 153 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 ASB16-AS1Q495Z4 193 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 CLLU1Q5K131 121 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 GLIPR1L1Q6UWM5 242 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 ZNF833PQ6ZTB9 187 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 CLECL1Q8IZS7 167 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 OR5AS1Q8N127 324 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 LINC00269Q8N2A0 174 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 LSM2Q9Y333 95 aaKnown RBP2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 FOCADQ5VW36 1801 aa2.46□□□□□ -2.02
SRGAP3-205ENST00000475560 MRC2Q9UBG0 1479 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 MGAMO43451 1857 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 SPEF2Q9C093 1822 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 KIF21AQ7Z4S6 1674 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 TRAV14DV4A0A0A6YYC5 116 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 CD2P06729 351 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 CXCL8P10145 99 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 CKS2P33552 79 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 KRTAP10-8P60410 259 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 IZUMO2Q6UXV1 221 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 FAM19A2Q8N3H0 131 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 Q8TAT8 98 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 STRCP1A6NGW2 1772 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 MBD5Q9P267 1494 aa2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 COL11A1P12107 1806 aaPredicted RBP2.45□□□□□ -2.02
SRGAP3-205ENST00000475560 CTTNBP2Q8WZ74 1663 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 FANCMQ8IYD8 2048 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 M0R129 80 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 GUCA1AP43080 201 aaPredicted RBP2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 C1orf137Q5JT78 98 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 CASC2Q6XLA1 102 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 BRD3OSQ6XYD6 125 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 C10orf111Q8N326 155 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 Q96M85 177 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 KTN1Q86UP2 1357 aaKnown RBP2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 GAPVD1Q14C86 1478 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 ABCC10Q5T3U5 1492 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 ANAPC1Q9H1A4 1944 aa2.44□□□□□ -2.02
SRGAP3-205ENST00000475560 NCKAP5O14513 1909 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 TRBV20-1A0A075B6N2 111 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 C3orf85A0A1B0GTC6 90 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 A6NN06 94 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 YPEL1O60688 119 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 IFNGP01579 166 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 RBP4P02753 201 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 FP248Q71RG6 208 aaPredicted RBP2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 Q8N2B8 174 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 SDF2Q99470 211 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 MPC1Q9Y5U8 109 aa2.43□□□□□ -2.02
SRGAP3-205ENST00000475560 CNTLNQ9NXG0 1405 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 NHSL1Q5SYE7 1610 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 ADGRB1O14514 1584 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 A0A0G2JMM0 328 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms