RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
PCGF3-209ENST00000475288 KLLNB2CW77 178 aa12.2□□□□□ -0.46
PCGF3-209ENST00000475288 IAH1Q2TAA2 248 aaPredicted RBP12.2□□□□□ -0.46
PCGF3-209ENST00000475288 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
PCGF3-209ENST00000475288 MED28Q9H204 178 aa12.2□□□□□ -0.46
PCGF3-209ENST00000475288 DNAJC4Q9NNZ3 241 aa12.2□□□□□ -0.46
PCGF3-209ENST00000475288 C7orf71A4D174 169 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 H3BTX0 84 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 SPINK4O60575 86 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 XGP55808 180 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 Q6ZRG5 221 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 NFE4Q86UQ8 179 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 FAM19A4Q96LR4 140 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 GSN-AS1Q9NRJ2 163 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 FUT9Q9Y231 359 aa12.19□□□□□ -0.46
PCGF3-209ENST00000475288 J3KRW8 73 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 K7EP13 123 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 SSNA1O43805 119 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
PCGF3-209ENST00000475288 NXPH4O95158 308 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 SCGB1D2O95969 90 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 INAFM2P0DMQ5 153 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 CAMLGP49069 296 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 TCL1AP56279 114 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 RAB31Q13636 194 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
PCGF3-209ENST00000475288 EIF4E3Q8N5X7 224 aaKnown RBP12.18□□□□□ -0.46
PCGF3-209ENST00000475288 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 LINC00477Q96M19 166 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 PFDN5Q99471 154 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 PRELID1Q9Y255 219 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
PCGF3-209ENST00000475288 hCG_2014768A0A024R1R8 64 aa12.17□□□□□ -0.46
PCGF3-209ENST00000475288 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
PCGF3-209ENST00000475288 NMBP08949 121 aa12.17□□□□□ -0.46
PCGF3-209ENST00000475288 SLAQ13239 276 aa12.17□□□□□ -0.46
PCGF3-209ENST00000475288 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
PCGF3-209ENST00000475288 MYCBP2O75592 4640 aa12.17□□□□□ -0.46
PCGF3-209ENST00000475288 MBPP02686 304 aaPredicted RBP12.16□□□□□ -0.46
PCGF3-209ENST00000475288 CRISP2P16562 243 aa12.16□□□□□ -0.46
PCGF3-209ENST00000475288 PDE6HQ13956 83 aa12.16□□□□□ -0.46
PCGF3-209ENST00000475288 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
PCGF3-209ENST00000475288 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
PCGF3-209ENST00000475288 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
PCGF3-209ENST00000475288 PAX4O43316 350 aa12.15□□□□□ -0.46
PCGF3-209ENST00000475288 GSKIPQ9P0R6 139 aa12.15□□□□□ -0.46
PCGF3-209ENST00000475288 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
PCGF3-209ENST00000475288 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 A0A087WTM6 91 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 TRAV5A0A0B4J249 113 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 MPDU1O75352 247 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
PCGF3-209ENST00000475288 RPL29P47914 159 aaKnown RBP12.14□□□□□ -0.47
PCGF3-209ENST00000475288 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 Q5VSD8 79 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 C9orf47Q6ZRZ4 202 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 FRZBQ92765 325 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 VGLL1Q99990 258 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 KLF12Q9Y4X4 402 aa12.14□□□□□ -0.47
PCGF3-209ENST00000475288 L7N2F9 121 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 M0R3E3 92 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 CRYBA4P53673 196 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 VAMP2P63027 116 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 CD300CQ08708 224 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 BTN1A1Q13410 526 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
PCGF3-209ENST00000475288 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 AKAP14Q86UN6 197 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 AGPAT4-IT1Q9H0P7 198 aa12.13□□□□□ -0.47
PCGF3-209ENST00000475288 NDUFB4O95168 129 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 IFNA5P01569 189 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
PCGF3-209ENST00000475288 H2BFSP57053 126 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 CYCSP99999 105 aaKnown RBP12.12□□□□□ -0.47
PCGF3-209ENST00000475288 ERCC8Q13216 396 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 NMES1Q9C002 83 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 C11orf1Q9H5F2 150 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 UQCC1Q9NVA1 299 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 HHLA3Q9XRX5 114 aa12.12□□□□□ -0.47
PCGF3-209ENST00000475288 SRRM2Q9UQ35 2752 aaKnown RBP12.11□□□□□ -0.47
PCGF3-209ENST00000475288 IL15RAQ13261 267 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 FHL2Q14192 279 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 NEGR1Q7Z3B1 354 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 TCTE3Q8IZS6 198 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 SLC39A9Q9NUM3 307 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 LY96Q9Y6Y9 160 aa12.11□□□□□ -0.47
PCGF3-209ENST00000475288 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
PCGF3-209ENST00000475288 GPX1P07203 203 aa12.1□□□□□ -0.47
PCGF3-209ENST00000475288 RNASE4P34096 147 aaKnown RBP12.1□□□□□ -0.47
PCGF3-209ENST00000475288 FUSP35637 526 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■■□□ 17.7
PCGF3-209ENST00000475288 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
PCGF3-209ENST00000475288 IQCF2Q8IXL9 164 aa12.1□□□□□ -0.47
PCGF3-209ENST00000475288 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
PCGF3-209ENST00000475288 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
PCGF3-209ENST00000475288 IGHV1OR15-1A0A075B7D0 117 aa12.09□□□□□ -0.47
PCGF3-209ENST00000475288 CCSO14618 274 aa12.09□□□□□ -0.47
PCGF3-209ENST00000475288 RGS13O14921 159 aa12.09□□□□□ -0.47
PCGF3-209ENST00000475288 CST7O76096 145 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms