RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 FAM25EA8MYX2 175 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 EPM2AB3EWF7 344 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 NXPH4O95158 308 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 TCRBP04435 133 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 TCL1AP56279 114 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 C12orf45Q8N5I9 185 aaPredicted RBP17.05■□□□□ 0.32
TMEM54-205ENST00000475208 FAM19A4Q96LR4 140 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 ICOSQ9Y6W8 199 aa17.05■□□□□ 0.32
TMEM54-205ENST00000475208 PAX4O43316 350 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 SPINK4O60575 86 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 NDUFB4O95168 129 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 RNASE4P34096 147 aaKnown RBP17.04■□□□□ 0.32
TMEM54-205ENST00000475208 FUSP35637 526 aaKnown RBP eCLIP17.04■□□□□ 0.32
TMEM54-205ENST00000475208 RPL29P47914 159 aaKnown RBP17.04■□□□□ 0.32
TMEM54-205ENST00000475208 BAXQ07812 192 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 VWC2Q2TAL6 325 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 LINC00299Q6ZSB3 139 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 LINC00477Q96M19 166 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 CCDC32Q9BV29 185 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 AGPAT4-IT1Q9H0P7 198 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 C11orf1Q9H5F2 150 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 PRELID1Q9Y255 219 aa17.04■□□□□ 0.32
TMEM54-205ENST00000475208 IGHV3-53P01767 116 aa17.03■□□□□ 0.32
TMEM54-205ENST00000475208 PGPEP1Q9NXJ5 209 aa17.03■□□□□ 0.32
TMEM54-205ENST00000475208 TMEM14CQ9P0S9 112 aa17.03■□□□□ 0.32
TMEM54-205ENST00000475208 TIMM9Q9Y5J7 89 aa17.03■□□□□ 0.32
TMEM54-205ENST00000475208 EREGO14944 169 aa17.02■□□□□ 0.32
TMEM54-205ENST00000475208 MPDU1O75352 247 aa17.02■□□□□ 0.32
TMEM54-205ENST00000475208 HIST1H1EP10412 219 aaKnown RBP17.02■□□□□ 0.32
TMEM54-205ENST00000475208 ERVFC1-1P60608 527 aa17.02■□□□□ 0.32
TMEM54-205ENST00000475208 ST6GAL2Q96JF0 529 aa17.02■□□□□ 0.32
TMEM54-205ENST00000475208 PTTG2Q9NZH5 202 aa17.02■□□□□ 0.32
TMEM54-205ENST00000475208 TRAV6A0A075B6T7 132 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 C5orf51A6NDU8 294 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 GPX1P07203 203 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 PYYP10082 97 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 CRISP2P16562 243 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 PDE6HQ13956 83 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 IBA57Q5T440 356 aaKnown RBP17.01■□□□□ 0.31
TMEM54-205ENST00000475208 EXOC3-AS1Q8N2X6 119 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 BLNKQ8WV28 456 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 NUDT15Q9NV35 164 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 MRPL16Q9NX20 251 aaKnown RBP17.01■□□□□ 0.31
TMEM54-205ENST00000475208 TP53TG3Q9ULZ0 132 aa17.01■□□□□ 0.31
TMEM54-205ENST00000475208 PVALBP20472 110 aaPredicted RBP17■□□□□ 0.31
TMEM54-205ENST00000475208 PRO0255Q9UI72 69 aa17■□□□□ 0.31
TMEM54-205ENST00000475208 TNFRSF18Q9Y5U5 241 aa17■□□□□ 0.31
TMEM54-205ENST00000475208 IGKV2-40A0A087WW87 121 aaPredicted RBP16.99■□□□□ 0.31
TMEM54-205ENST00000475208 IGSF23A1L1A6 192 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 RGS13O14921 159 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 IGKV2D-40P01614 121 aaPredicted RBP16.99■□□□□ 0.31
TMEM54-205ENST00000475208 FGF7P21781 194 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 S100A11P31949 105 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 SULT1A1P50225 295 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 PRR9Q5T870 116 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 CDPF1Q6NVV7 123 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 C9orf47Q6ZRZ4 202 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 ZFAND2AQ8N6M9 145 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 SEC22CQ9BRL7 303 aa16.99■□□□□ 0.31
TMEM54-205ENST00000475208 LYRM2Q9NU23 88 aaPredicted RBP16.99■□□□□ 0.31
TMEM54-205ENST00000475208 S100A10P60903 97 aa16.98■□□□□ 0.31
TMEM54-205ENST00000475208 STX12Q86Y82 276 aa16.98■□□□□ 0.31
TMEM54-205ENST00000475208 CHAC2Q8WUX2 184 aa16.98■□□□□ 0.31
TMEM54-205ENST00000475208 C2orf50Q96LR7 162 aa16.98■□□□□ 0.31
TMEM54-205ENST00000475208 ARPC5LQ9BPX5 153 aa16.98■□□□□ 0.31
TMEM54-205ENST00000475208 AAMDCQ9H7C9 122 aa16.98■□□□□ 0.31
TMEM54-205ENST00000475208 FAT1Q14517 4588 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 NMBP08949 121 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 CRYBA4P53673 196 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 HBG1P69891 147 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 HBG2P69892 147 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 ICAM4Q14773 271 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 TMEM78Q5T7P6 136 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 Q6ZQT7 251 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 LYPD1Q8N2G4 141 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 TMEM252Q8N6L7 170 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 S100ZQ8WXG8 99 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 C8orf49Q96NF6 230 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 VGLL1Q99990 258 aa16.97■□□□□ 0.31
TMEM54-205ENST00000475208 IGHV1OR15-1A0A075B7D0 117 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 A6NHS1 94 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 H2AFB2P0C5Z0 115 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 XGP55808 180 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 SLAQ13239 276 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 GCSAMLQ5JQS6 135 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 FAM122CQ6P4D5 195 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 LYPD5Q6UWN5 251 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 NFE4Q86UQ8 179 aa16.96■□□□□ 0.31
TMEM54-205ENST00000475208 FAM240BA0A1B0GVZ2 78 aa16.95■□□□□ 0.3
TMEM54-205ENST00000475208 DNAH10OSP0CZ25 163 aa16.95■□□□□ 0.3
TMEM54-205ENST00000475208 INAFM2P0DMQ5 153 aa16.95■□□□□ 0.3
TMEM54-205ENST00000475208 MRPL23Q16540 153 aaKnown RBP16.95■□□□□ 0.3
TMEM54-205ENST00000475208 SLC25A2Q9BXI2 301 aa16.95■□□□□ 0.3
TMEM54-205ENST00000475208 HHLA3Q9XRX5 114 aa16.95■□□□□ 0.3
TMEM54-205ENST00000475208 PRAF2O60831 178 aa16.94■□□□□ 0.3
TMEM54-205ENST00000475208 ASAH1Q13510 395 aa16.94■□□□□ 0.3
TMEM54-205ENST00000475208 RAB32Q13637 225 aa16.94■□□□□ 0.3
TMEM54-205ENST00000475208 FHL2Q14192 279 aa16.94■□□□□ 0.3
TMEM54-205ENST00000475208 NPCDR1Q9BY65 106 aa16.94■□□□□ 0.3
TMEM54-205ENST00000475208 GPN1Q9HCN4 374 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms