RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 F11RQ9Y624 299 aaKnown RBP3.78□□□□□ -1.8
NPHP3-206ENST00000474871 VCANP13611 3396 aa3.78□□□□□ -1.8
NPHP3-206ENST00000474871 F5H697 171 aa3.78□□□□□ -1.81
NPHP3-206ENST00000474871 RUSC1-AS1Q66K80 236 aa3.78□□□□□ -1.81
NPHP3-206ENST00000474871 FAM19A2Q8N3H0 131 aa3.78□□□□□ -1.81
NPHP3-206ENST00000474871 ZNF256Q9Y2P7 627 aaPredicted RBP3.78□□□□□ -1.81
NPHP3-206ENST00000474871 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 BCL2P10415 239 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 CMC4P56277 68 aaPredicted RBP3.77□□□□□ -1.81
NPHP3-206ENST00000474871 SS18Q15532 418 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 MLANAQ16655 118 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 FAM27BQ5VT28 67 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 SPACA3Q8IXA5 215 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 VKORC1L1Q8N0U8 176 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 WFDC11Q8NEX6 87 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 SCN3AQ9NY46 2000 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 MUC3AQ02505 3323 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 DMKNQ6E0U4 476 aaPredicted RBP3.77□□□□□ -1.81
NPHP3-206ENST00000474871 C5orf38Q86SI9 138 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 MDP1Q86V88 176 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 C10orf105Q8TEF2 133 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 U3KQE9 123 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 H3BP45 60 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 CCL8P80075 99 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 RAB37Q96AX2 223 aa3.77□□□□□ -1.81
NPHP3-206ENST00000474871 MRPL18Q9H0U6 180 aaKnown RBP3.77□□□□□ -1.81
NPHP3-206ENST00000474871 SPTBP11277 2137 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 DPM2O94777 84 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 EGR2P11161 476 aaPredicted RBP3.76□□□□□ -1.81
NPHP3-206ENST00000474871 LINC01545Q5VT33 79 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 TMEM136Q6ZRR5 245 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 FDCSPQ8NFU4 85 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 CREBBPQ92793 2442 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 IGKV3-11P04433 115 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 RPL27AP46776 148 aaKnown RBP3.76□□□□□ -1.81
NPHP3-206ENST00000474871 UBE2D3P61077 147 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 UBE2D2P62837 147 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 ZNF816Q0VGE8 651 aaPredicted RBP3.76□□□□□ -1.81
NPHP3-206ENST00000474871 ECSCRQ19T08 205 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 LINC00114Q6XXX2 140 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 C2orf50Q96LR7 162 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 PMCHL2Q9BQD1 86 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 TMEM167BQ9NRX6 74 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 NUP214P35658 2090 aaPredicted RBP3.76□□□□□ -1.81
NPHP3-206ENST00000474871 WISP1O95388 367 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 SAA4P35542 130 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 DEFB121Q5J5C9 76 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 PAPPA-AS1Q5QFB9 102 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 BAGE3Q86Y29 109 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 BAGE2Q86Y30 109 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 CEND1Q8N111 149 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 METTL26Q96S19 204 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 ESM1Q9NQ30 184 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 ABCA1O95477 2261 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 LOC101059948A0A1B0GTJ6 334 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 FAM240AA0A1B0GVK7 77 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 H7C1H1 209 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 BUB3O43684 328 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 PSPNO60542 156 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 SRSF10O75494 262 aaKnown RBP3.76□□□□□ -1.81
NPHP3-206ENST00000474871 GYPAP02724 150 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 TCRAP04437 139 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 QRFPP83859 136 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 TMEM187Q14656 261 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 RPP25LQ8N5L8 163 aaKnown RBP3.76□□□□□ -1.81
NPHP3-206ENST00000474871 OR9G1Q8NH87 305 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 NABP1Q96AH0 204 aa3.76□□□□□ -1.81
NPHP3-206ENST00000474871 SPEGQ15772 3267 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 TRBV7-6A0A0J9YX20 115 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 NEURL1O76050 574 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 FHL1Q13642 323 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 OVOL2Q9BRP0 275 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 NAA60Q9H7X0 242 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 ANAPC10Q9UM13 185 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 COL27A1Q8IZC6 1860 aaPredicted RBP3.75□□□□□ -1.81
NPHP3-206ENST00000474871 INS-IGF2F8WCM5 200 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 COX6A1P12074 109 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 LYZP61626 148 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 Q6P435 159 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 SMCR5Q8TEV8 140 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 ZNF503Q96F45 646 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 IGLV3-12A0A075B6K2 115 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 IGKV1D-43A0A0B4J1Z2 117 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 SSSCA1O60232 199 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 SNRPD3P62318 126 aaKnown RBP3.75□□□□□ -1.81
NPHP3-206ENST00000474871 PQLC2Q6ZP29 291 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 C16orf47Q6ZP98 133 aaPredicted RBP3.75□□□□□ -1.81
NPHP3-206ENST00000474871 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.75□□□□□ -1.81
NPHP3-206ENST00000474871 C19orf73Q9NVV2 129 aa3.75□□□□□ -1.81
NPHP3-206ENST00000474871 NBASA2RRP1 2371 aa3.74□□□□□ -1.81
NPHP3-206ENST00000474871 C3orf85A0A1B0GTC6 90 aa3.74□□□□□ -1.81
NPHP3-206ENST00000474871 hADV29S1A0JD25 119 aa3.74□□□□□ -1.81
NPHP3-206ENST00000474871 F6UB75 175 aa3.74□□□□□ -1.81
NPHP3-206ENST00000474871 H3BTX0 84 aa3.74□□□□□ -1.81
NPHP3-206ENST00000474871 LGALS9O00182 355 aa3.74□□□□□ -1.81
NPHP3-206ENST00000474871 SRSF9Q13242 221 aaKnown RBP eCLIP3.74□□□□□ -1.81
NPHP3-206ENST00000474871 GDF5OSQ5U4N7 250 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms