RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 DUX3Q96PT4 197 aa15□□□□□ -0.01
SSR1-204ENST00000474597 PRR25Q96S07 402 aa15□□□□□ -0.01
SSR1-204ENST00000474597 MTORP42345 2549 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 SMIM27A0A1W2PRY6 76 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 ID1P41134 155 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 TCL1AP56279 114 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 TMEM78Q5T7P6 136 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 HIST2H2BDQ6DRA6 164 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 TSSC4Q9Y5U2 329 aaPredicted RBP14.99□□□□□ -0.01
SSR1-204ENST00000474597 TRGC2P03986 189 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 TYMSP04818 313 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 OR4B1Q8NGF8 309 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 C20orf173Q96LM9 149 aa14.99□□□□□ -0.01
SSR1-204ENST00000474597 WFDC3Q8IUB2 231 aa14.98□□□□□ -0.01
SSR1-204ENST00000474597 TSKUQ8WUA8 353 aa14.98□□□□□ -0.01
SSR1-204ENST00000474597 A8MWL6 223 aa14.97□□□□□ -0.01
SSR1-204ENST00000474597 CT83Q5H943 113 aa14.97□□□□□ -0.01
SSR1-204ENST00000474597 CITED2Q99967 270 aaPredicted RBP14.97□□□□□ -0.01
SSR1-204ENST00000474597 OVOL1O14753 267 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 SMUG1Q53HV7 270 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 OR9G4Q8NGQ1 327 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 OR10J6PQ8NGY7 276 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 IZUMO1RA6ND01 250 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 CRLF1O75462 422 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 ZNF138P52744 262 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 OR2D3Q8NGH3 330 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 DLX4Q92988 240 aaPredicted RBP14.96□□□□□ -0.01
SSR1-204ENST00000474597 AGPAT4-IT1Q9H0P7 198 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 MS4A6AQ9H2W1 248 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 NAT8BQ9UHF3 227 aa14.96□□□□□ -0.01
SSR1-204ENST00000474597 CUBNO60494 3623 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 NPIPB6E9PJ23 425 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 S100A6P06703 90 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 TFPI2P48307 235 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 FAM162BQ5T6X4 162 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 C9orf47Q6ZRZ4 202 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 COX8CQ7Z4L0 72 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 DCANP1Q8TF63 244 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 RAX2Q96IS3 184 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 GPR61Q9BZJ8 451 aa14.95□□□□□ -0.02
SSR1-204ENST00000474597 CCL24O00175 119 aa14.94□□□□□ -0.02
SSR1-204ENST00000474597 SPINK4O60575 86 aa14.94□□□□□ -0.02
SSR1-204ENST00000474597 NEU1Q99519 415 aa14.94□□□□□ -0.02
SSR1-204ENST00000474597 CRIP1P50238 77 aa14.94□□□□□ -0.02
SSR1-204ENST00000474597 PAFAH1B2P68402 229 aa14.94□□□□□ -0.02
SSR1-204ENST00000474597 HIGD1CA8MV81 97 aa14.93□□□□□ -0.02
SSR1-204ENST00000474597 PROK1P58294 105 aa14.93□□□□□ -0.02
SSR1-204ENST00000474597 LINC00477Q96M19 166 aa14.93□□□□□ -0.02
SSR1-204ENST00000474597 GFRA4Q9GZZ7 299 aa14.93□□□□□ -0.02
SSR1-204ENST00000474597 TRAPPC1Q9Y5R8 145 aa14.93□□□□□ -0.02
SSR1-204ENST00000474597 LOC105371267A0A1B0GV96 52 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 SH2D1AO60880 128 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 ZNF705DP0CH99 300 aaPredicted RBP14.92□□□□□ -0.02
SSR1-204ENST00000474597 ZNF705BP0CI00 300 aaPredicted RBP14.92□□□□□ -0.02
SSR1-204ENST00000474597 SNRPD3P62318 126 aaKnown RBP14.92□□□□□ -0.02
SSR1-204ENST00000474597 NUP35Q8NFH5 326 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 DYNLRB2Q8TF09 96 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 SRSF2Q01130 221 aaKnown RBP14.92□□□□□ -0.02
SSR1-204ENST00000474597 HIST1H1AQ02539 215 aaPredicted RBP14.92□□□□□ -0.02
SSR1-204ENST00000474597 ACTL10Q5JWF8 245 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 FRZBQ92765 325 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 PPP1R14DQ9NXH3 145 aa14.92□□□□□ -0.02
SSR1-204ENST00000474597 FABP9Q0Z7S8 132 aa14.91□□□□□ -0.02
SSR1-204ENST00000474597 COX19Q49B96 90 aa14.91□□□□□ -0.02
SSR1-204ENST00000474597 MRPL54Q6P161 138 aaKnown RBP14.91□□□□□ -0.02
SSR1-204ENST00000474597 ADAMTSL5Q6ZMM2 481 aa14.91□□□□□ -0.02
SSR1-204ENST00000474597 OR8A1Q8NGG7 326 aa14.91□□□□□ -0.02
SSR1-204ENST00000474597 LENEPQ9Y5L5 61 aa14.91□□□□□ -0.02
SSR1-204ENST00000474597 XKRY2A2RUG3 117 aa14.9□□□□□ -0.02
SSR1-204ENST00000474597 TMEM189A5PLL7 270 aa14.9□□□□□ -0.02
SSR1-204ENST00000474597 FAM231BA6NCW3 169 aa14.9□□□□□ -0.02
SSR1-204ENST00000474597 K7EQG2 157 aa14.9□□□□□ -0.02
SSR1-204ENST00000474597 FHL3Q13643 280 aa14.9□□□□□ -0.02
SSR1-204ENST00000474597 NF1P21359 2839 aa14.9□□□□□ -0.02
SSR1-204ENST00000474597 FABP5P3A8MUU1 101 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 CSN3P07498 182 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 ZNF688P0C7X2 276 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 TRGC1P0CF51 173 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 WDR73Q6P4I2 378 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 RBPMS2Q6ZRY4 209 aaKnown RBP14.89□□□□□ -0.03
SSR1-204ENST00000474597 GZMBP10144 247 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 ZNF80P51504 273 aaPredicted RBP14.89□□□□□ -0.03
SSR1-204ENST00000474597 PSMG4Q5JS54 123 aa14.89□□□□□ -0.03
SSR1-204ENST00000474597 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 F6UB75 175 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BKO60814 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BJP06899 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BOP23527 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BBP33778 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BDP58876 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 DEFB1P60022 68 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 RAB4BP61018 213 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BCP62807 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST2H2BEQ16778 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.88□□□□□ -0.03
SSR1-204ENST00000474597 GTSF1Q8WW33 167 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BHQ93079 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 PGLYRP4Q96LB8 373 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BNQ99877 126 aa14.88□□□□□ -0.03
SSR1-204ENST00000474597 HIST1H2BMQ99879 126 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms