RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 TCRBV4S1A1TA0A5B7 111 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 C15orf62A8K5M9 175 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 IBA57-AS1B1ANH7 110 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 RNASE4P34096 147 aaKnown RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 KIAA0087Q14695 138 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 ZNF791Q3KP31 576 aaPredicted RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 ZNF584Q8IVC4 421 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 FAM223AQ8IWN6 122 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 DIRC1Q969H9 104 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 TMSB15BA0A087X1C1 80 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 A6NN06 94 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 H7BZZ5 65 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 HBDP02042 147 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 RNASE2P10153 161 aaKnown RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 GCHFRP30047 84 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 RPL18Q07020 188 aaKnown RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 RBMY1FQ15415 496 aaKnown RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 ATP1A1-AS1Q5TC04 95 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 Q6P435 159 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 C18orf65Q6ZTR6 163 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 ITLN1Q8WWA0 313 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 ITLN2Q8WWU7 325 aaPredicted RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 COPS9Q8WXC6 57 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 MGST2Q99735 147 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 HCSTQ9UBK5 93 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 IGKV1D-17A0A075B6S4 117 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 IGHV1OR15-9A0A0B4J2B8 117 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 ADARB2-AS1A8MUL3 147 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 C12orf77C9JDV5 145 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 FRMD6-AS1P0C7T7 363 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 HOXA4Q00056 320 aaPredicted RBP2.59□□□□□ -1.99
UBR3-208ENST00000474426 ZNF876PQ49A33 203 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 LINC00173Q6ZV60 143 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 SLC50A1Q9BRV3 221 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 TMEM243Q9BU79 118 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 MED13Q9UHV7 2174 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 A0A0C4DFX4 3053 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 IGHV1-24A0A0C4DH33 117 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 PSPHP1O15172 72 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 SSBP1Q04837 148 aaKnown RBP2.59□□□□□ -1.99
UBR3-208ENST00000474426 LINC01554Q52M75 96 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 DEFB121Q5J5C9 76 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 SCN3AQ9NY46 2000 aa2.59□□□□□ -1.99
UBR3-208ENST00000474426 BPTFQ12830 3046 aa2.59□□□□□ -2
UBR3-208ENST00000474426 IGHV3OR15-7A0A075B7D8 119 aa2.59□□□□□ -2
UBR3-208ENST00000474426 TRAV1-2A0A0B4J238 106 aa2.59□□□□□ -2
UBR3-208ENST00000474426 TRBV5-4A0A0C4DH59 114 aa2.59□□□□□ -2
UBR3-208ENST00000474426 TCRBV5S1A1TA0A578 114 aa2.59□□□□□ -2
UBR3-208ENST00000474426 PCBD1P61457 104 aa2.59□□□□□ -2
UBR3-208ENST00000474426 KISS1Q15726 138 aa2.59□□□□□ -2
UBR3-208ENST00000474426 GDF5OSQ5U4N7 250 aa2.59□□□□□ -2
UBR3-208ENST00000474426 FAM104BQ5XKR9 115 aa2.59□□□□□ -2
UBR3-208ENST00000474426 NKAPP1Q8N9T2 125 aa2.59□□□□□ -2
UBR3-208ENST00000474426 URB1-AS1Q96HZ7 61 aa2.59□□□□□ -2
UBR3-208ENST00000474426 TRGV9Q99603 122 aa2.59□□□□□ -2
UBR3-208ENST00000474426 XCL2Q9UBD3 114 aa2.59□□□□□ -2
UBR3-208ENST00000474426 MGAMO43451 1857 aa2.59□□□□□ -2
UBR3-208ENST00000474426 HEATR1Q9H583 2144 aaKnown RBP2.59□□□□□ -2
UBR3-208ENST00000474426 DOT1LQ8TEK3 1739 aa2.59□□□□□ -2
UBR3-208ENST00000474426 PCNX2A6NKB5 2137 aa2.59□□□□□ -2
UBR3-208ENST00000474426 PINLYPA6NC86 204 aa2.58□□□□□ -2
UBR3-208ENST00000474426 PSMB2P49721 201 aa2.58□□□□□ -2
UBR3-208ENST00000474426 FAM229BQ4G0N7 80 aa2.58□□□□□ -2
UBR3-208ENST00000474426 KIAA1549LQ6ZVL6 1849 aa2.58□□□□□ -2
UBR3-208ENST00000474426 SLIT2O94813 1529 aa2.58□□□□□ -2
UBR3-208ENST00000474426 AQP1P29972 269 aa2.58□□□□□ -2
UBR3-208ENST00000474426 DYNLT3P51808 116 aa2.58□□□□□ -2
UBR3-208ENST00000474426 ZNF138P52744 262 aa2.58□□□□□ -2
UBR3-208ENST00000474426 RPS21P63220 83 aaKnown RBP2.58□□□□□ -2
UBR3-208ENST00000474426 CLLU1OSQ5K130 101 aa2.58□□□□□ -2
UBR3-208ENST00000474426 C12orf73Q69YU5 71 aa2.58□□□□□ -2
UBR3-208ENST00000474426 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
UBR3-208ENST00000474426 BPESC1Q9GZL8 116 aa2.58□□□□□ -2
UBR3-208ENST00000474426 GNG13Q9P2W3 67 aa2.58□□□□□ -2
UBR3-208ENST00000474426 NRXN2Q9P2S2 1712 aa2.58□□□□□ -2
UBR3-208ENST00000474426 ZNF627Q7L945 461 aa2.58□□□□□ -2
UBR3-208ENST00000474426 C6orf201Q7Z4U5 140 aa2.58□□□□□ -2
UBR3-208ENST00000474426 ZNF71Q9NQZ8 489 aaPredicted RBP2.58□□□□□ -2
UBR3-208ENST00000474426 DSCAMO60469 2012 aa2.58□□□□□ -2
UBR3-208ENST00000474426 IGKV1-12A0A0C4DH73 117 aa2.58□□□□□ -2
UBR3-208ENST00000474426 TEX49A0A1B0GTD5 131 aa2.58□□□□□ -2
UBR3-208ENST00000474426 SLC25A20O43772 301 aa2.58□□□□□ -2
UBR3-208ENST00000474426 IGKV1D-12P01611 117 aa2.58□□□□□ -2
UBR3-208ENST00000474426 NCBP2P52298 156 aaKnown RBP eCLIP2.58□□□□□ -2
UBR3-208ENST00000474426 SYNJ2BPP57105 145 aa2.58□□□□□ -2
UBR3-208ENST00000474426 RPS18P62269 152 aaKnown RBP2.58□□□□□ -2
UBR3-208ENST00000474426 FBXL19-AS1Q494R0 122 aa2.58□□□□□ -2
UBR3-208ENST00000474426 S100A7L2Q5SY68 101 aa2.58□□□□□ -2
UBR3-208ENST00000474426 LINC00643Q86TS7 51 aa2.58□□□□□ -2
UBR3-208ENST00000474426 MDP1Q86V88 176 aa2.58□□□□□ -2
UBR3-208ENST00000474426 FAM3DQ96BQ1 224 aa2.58□□□□□ -2
UBR3-208ENST00000474426 SPRR3Q9UBC9 169 aa2.58□□□□□ -2
UBR3-208ENST00000474426 DSCAML1Q8TD84 2053 aa2.57□□□□□ -2
UBR3-208ENST00000474426 NRXN3Q9Y4C0 1643 aa2.57□□□□□ -2
UBR3-208ENST00000474426 PLXNA2O75051 1894 aa2.57□□□□□ -2
UBR3-208ENST00000474426 K7EMI3 77 aa2.57□□□□□ -2
UBR3-208ENST00000474426 IGLV3-27P01718 113 aa2.57□□□□□ -2
UBR3-208ENST00000474426 ZNF22P17026 224 aaPredicted RBP2.57□□□□□ -2
UBR3-208ENST00000474426 SEC61BP60468 96 aaKnown RBP2.57□□□□□ -2
UBR3-208ENST00000474426 CRIP3Q6Q6R5 217 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms