RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 ICAM4Q14773 271 aa11.47□□□□□ -0.57
CPA4-205ENST00000474254 FCN2Q15485 313 aa11.47□□□□□ -0.57
CPA4-205ENST00000474254 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
CPA4-205ENST00000474254 SMIM3Q9BZL3 60 aa11.47□□□□□ -0.57
CPA4-205ENST00000474254 J3KRW8 73 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 IFNA5P01569 189 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 OR10J4P0C629 311 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 ERCC8Q13216 396 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 FFAR4Q5NUL3 377 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 C15orf53Q8NAA6 179 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 PHYHIPLQ96FC7 376 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 FAM19A4Q96LR4 140 aa11.46□□□□□ -0.57
CPA4-205ENST00000474254 IGKV2-40A0A087WW87 121 aaPredicted RBP11.45□□□□□ -0.58
CPA4-205ENST00000474254 TRAV12-3A0A0B4J271 114 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 KLLNB2CW77 178 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 OR7C2O60412 319 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 IGKV2D-40P01614 121 aaPredicted RBP11.45□□□□□ -0.58
CPA4-205ENST00000474254 SLC25A5P05141 298 aaKnown RBP11.45□□□□□ -0.58
CPA4-205ENST00000474254 ATP5G1P05496 136 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 ATP5G3P48201 142 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 RNF212Q495C1 297 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 FAM122CQ6P4D5 195 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 RNF141Q8WVD5 230 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 ZNF503Q96F45 646 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 LINC00477Q96M19 166 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 AGPAT4-IT1Q9H0P7 198 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 WFDC1Q9HC57 220 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 NOP10Q9NPE3 64 aaKnown RBP11.45□□□□□ -0.58
CPA4-205ENST00000474254 MUC4Q99102 2169 aa11.45□□□□□ -0.58
CPA4-205ENST00000474254 C7orf71A4D174 169 aa11.44□□□□□ -0.58
CPA4-205ENST00000474254 CBY3A6NI87 242 aa11.44□□□□□ -0.58
CPA4-205ENST00000474254 CRISP2P16562 243 aa11.44□□□□□ -0.58
CPA4-205ENST00000474254 CCDC28AQ8IWP9 274 aa11.44□□□□□ -0.58
CPA4-205ENST00000474254 LINC00612Q8N6U2 182 aa11.44□□□□□ -0.58
CPA4-205ENST00000474254 ABCA13Q86UQ4 5058 aa11.44□□□□□ -0.58
CPA4-205ENST00000474254 F5H768 121 aa11.43□□□□□ -0.58
CPA4-205ENST00000474254 UBE2L3P68036 154 aaKnown RBP11.43□□□□□ -0.58
CPA4-205ENST00000474254 KHDC3LQ587J8 217 aa11.43□□□□□ -0.58
CPA4-205ENST00000474254 TMEM78Q5T7P6 136 aa11.43□□□□□ -0.58
CPA4-205ENST00000474254 Q6ZR54 194 aa11.43□□□□□ -0.58
CPA4-205ENST00000474254 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 NMBP08949 121 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 TAS2R45P59539 299 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 CD300CQ08708 224 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 BTN1A1Q13410 526 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 LYPD1Q8N2G4 141 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 VGLL1Q99990 258 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 MED28Q9H204 178 aa11.42□□□□□ -0.58
CPA4-205ENST00000474254 ZNF324O75467 553 aaPredicted RBP11.41□□□□□ -0.58
CPA4-205ENST00000474254 LINC00467Q9BRT7 94 aa11.41□□□□□ -0.58
CPA4-205ENST00000474254 ATG101Q9BSB4 218 aa11.41□□□□□ -0.58
CPA4-205ENST00000474254 Q9H3A6 140 aa11.41□□□□□ -0.58
CPA4-205ENST00000474254 ZNF492Q9P255 531 aa11.41□□□□□ -0.58
CPA4-205ENST00000474254 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 GPX1P07203 203 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 M6PRP20645 277 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
CPA4-205ENST00000474254 ACOT6Q3I5F7 207 aaPredicted RBP11.4□□□□□ -0.58
CPA4-205ENST00000474254 PRR9Q5T870 116 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 ZNF575Q86XF7 245 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 ZNF680Q8NEM1 530 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
CPA4-205ENST00000474254 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
CPA4-205ENST00000474254 RNASE4P34096 147 aaKnown RBP11.39□□□□□ -0.59
CPA4-205ENST00000474254 CSN1S1P47710 185 aa11.39□□□□□ -0.59
CPA4-205ENST00000474254 ZNF138P52744 262 aa11.39□□□□□ -0.59
CPA4-205ENST00000474254 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
CPA4-205ENST00000474254 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
CPA4-205ENST00000474254 ZNF266Q14584 549 aa11.39□□□□□ -0.59
CPA4-205ENST00000474254 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
CPA4-205ENST00000474254 EIF4E3Q8N5X7 224 aaKnown RBP11.39□□□□□ -0.59
CPA4-205ENST00000474254 Q8TAT8 98 aa11.39□□□□□ -0.59
CPA4-205ENST00000474254 GAGE12BA1L429 117 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 EIF3GO75821 320 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPA4-205ENST00000474254 GAGE7O76087 117 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 GIPP09681 153 aaPredicted RBP11.38□□□□□ -0.59
CPA4-205ENST00000474254 GAGE12FP0CL80 117 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 GAGE12GP0CL81 117 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 GAGE12IP0CL82 117 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 RAB2AP61019 212 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 ASB13Q8WXK3 278 aa11.38□□□□□ -0.59
CPA4-205ENST00000474254 NUDT3O95989 172 aa11.37□□□□□ -0.59
CPA4-205ENST00000474254 Q6ZTI0 123 aa11.37□□□□□ -0.59
CPA4-205ENST00000474254 OR2G3Q8NGZ4 309 aa11.37□□□□□ -0.59
CPA4-205ENST00000474254 GSN-AS1Q9NRJ2 163 aa11.37□□□□□ -0.59
CPA4-205ENST00000474254 A0A1W2PPV4 95 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 TCL1AP56279 114 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 IBA57Q5T440 356 aaKnown RBP11.36□□□□□ -0.59
CPA4-205ENST00000474254 HSD17B11Q8NBQ5 300 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 OR10G4Q8NGN3 311 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 OR10G9Q8NGN4 311 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 OR10G7Q8NGN6 311 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms