RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ADGBQ8N7X0 1667 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 A6NN06 94 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 IGHV3-30P01768 117 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 IGHV3-30-5P0DP03 117 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 FABP2P12104 132 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 EVI2AP22794 236 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 PHF5AQ7RTV0 110 aaKnown RBP0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 STX19Q8N4C7 294 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 FAM24BQ8N5W8 94 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 DYDC1Q8WWB3 177 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 PLEKHB2Q96CS7 222 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 SS18L2Q9UHA2 77 aa0.21□□□□□ -2.38
ECHDC1-213ENST00000474240 FRMPD1Q5SYB0 1578 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 SAA1P0DJI8 122 aaPredicted RBP0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 DNAJB13P59910 316 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 GNG3P63215 75 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 TCTEX1D1Q8N7M0 179 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 OR5H6Q8NGV6 325 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 BIN3Q9NQY0 253 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 LAMTOR2Q9Y2Q5 125 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 TRAPPC8Q9Y2L5 1435 aa0.2□□□□□ -2.38
ECHDC1-213ENST00000474240 LOC107986453A0A1B0GWG9 222 aa0.19□□□□□ -2.38
ECHDC1-213ENST00000474240 ZCCHC23Q6ZST2 131 aa0.19□□□□□ -2.38
ECHDC1-213ENST00000474240 OR8J3Q8NGG0 315 aa0.19□□□□□ -2.38
ECHDC1-213ENST00000474240 AP3S1Q92572 193 aa0.19□□□□□ -2.38
ECHDC1-213ENST00000474240 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
ECHDC1-213ENST00000474240 DSPPQ9NZW4 1301 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 A0A1W2PPB8 328 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 A0A1W2PRS3 328 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 KIR3DP1A8MWS1 328 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 FXYD1O00168 92 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 SDC2P34741 201 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 SRP9P49458 86 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 MAXP61244 160 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 CCSMST1Q4G0I0 132 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 IZUMO2Q6UXV1 221 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 LINC00269Q8N2A0 174 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 NABP2Q9BQ15 211 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 MRPL35Q9NZE8 188 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 NUBP2Q9Y5Y2 271 aa0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 EIF3AQ14152 1382 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-213ENST00000474240 TNCP24821 2201 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 CSN2P05814 226 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 SERPINB1P30740 379 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 TAS2R41P59536 307 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 GLYATL3Q5SZD4 288 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 TMEM229BQ8NBD8 167 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 CLEC2BQ92478 149 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 ASB4Q9Y574 426 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 SPTBP11277 2137 aa0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 ANKRD17O75179 2603 aaKnown RBP0.17□□□□□ -2.38
ECHDC1-213ENST00000474240 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 HIGD1CA8MV81 97 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 MFSD11O43934 449 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 LY6G6CO95867 125 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 FAM107AO95990 144 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 SDC4P31431 198 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 ETV6P41212 452 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 LYG2Q86SG7 212 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 SMIM7Q9BQ49 75 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 CCDC32Q9BV29 185 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 C19orf12Q9NSK7 152 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 DLC1Q96QB1 1528 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 ROCK1Q13464 1354 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 ZDBF2Q9HCK1 2354 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 MAST4O15021 2626 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 FRAS1Q86XX4 4008 aa0.16□□□□□ -2.38
ECHDC1-213ENST00000474240 LOC107984156A0A0G2JMH3 177 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 TRDV1A0A1B0GX56 115 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 TMEM30CPA0ZSE6 113 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 IFITM5A6NNB3 132 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 SPINK1P00995 79 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 KRTAP2-3P0C7H8 128 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 BCL2P10415 239 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 RPL37P61927 97 aaKnown RBP0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 LTC4SQ16873 150 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 TRIQKQ629K1 86 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 C3orf33Q6P1S2 294 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 ANGPTL5Q86XS5 388 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 ARL17AQ8IVW1 177 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 SMIM20Q8N5G0 67 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 CCL4L1Q8NHW4 92 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 PPP1R1CQ8WVI7 109 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 DIRC1Q969H9 104 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 LXNQ9BS40 222 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 KRTAP2-4Q9BYR9 128 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 KRTAP2-1Q9BYU5 128 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 ASH1LQ9NR48 2969 aaKnown RBP0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 IL20Q9NYY1 176 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 KIAA1549LQ6ZVL6 1849 aa0.15□□□□□ -2.39
ECHDC1-213ENST00000474240 TECPR2O15040 1411 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 MCRIP1C9JLW8 97 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 PPP5D1E7EU14 171 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 GABARAPH6UMI1 98 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 PGRMC1O00264 195 aaKnown RBP0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 TPST1O60507 370 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 EDF1O60869 148 aaKnown RBP0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 GLRXP35754 106 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 UFC1Q9Y3C8 167 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 MPC1Q9Y5U8 109 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms