RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, human

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-204	ENST00000474144	CD300C	Q08708	224 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	BTN1A1	Q13410	526 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	ZNF503	Q96F45	646 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	VGLL1	Q99990	258 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	PAXX	Q9BUH6	204 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	MRPL32	Q9BYC8	188 aa	Known RBP	13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	AAMDC	Q9H7C9	122 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	BATF3	Q9NR55	127 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	MBD2	Q9UBB5	411 aa		13.94	□□□□□ -0.18
TMEM54-204	ENST00000474144	C7orf71	A4D174	169 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	SLC25A5	P05141	298 aa	Known RBP	13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	RPL12	P30050	165 aa	Known RBP	13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144		Q6ZR54	194 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	LINC00336	Q6ZUF6	198 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	LINC00612	Q8N6U2	182 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	RNF141	Q8WVD5	230 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	PHYHIPL	Q96FC7	376 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	LINC00477	Q96M19	166 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	WFDC1	Q9HC57	220 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	KCNIP2	Q9NS61	270 aa		13.93	□□□□□ -0.18
TMEM54-204	ENST00000474144	GAGE12B	A1L429	117 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	KLLN	B2CW77	178 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	ZNF324	O75467	553 aa	Predicted RBP	13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	EIF3G	O75821	320 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	GAGE7	O76087	117 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	GAGE12F	P0CL80	117 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	GAGE12G	P0CL81	117 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	GAGE12I	P0CL82	117 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	PET100	P0DJ07	73 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	FFAR4	Q5NUL3	377 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144		Q6ZQT7	251 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	C9orf47	Q6ZRZ4	202 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	PYGO2	Q9BRQ0	406 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	PKD1	P98161	4303 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144	KIAA1109	Q2LD37	5005 aa		13.92	□□□□□ -0.18
TMEM54-204	ENST00000474144		A0A1B0GVY2	172 aa		13.91	□□□□□ -0.18
TMEM54-204	ENST00000474144	SNURFL	B1AK76	121 aa		13.91	□□□□□ -0.18
TMEM54-204	ENST00000474144	RNASE4	P34096	147 aa	Known RBP	13.91	□□□□□ -0.18
TMEM54-204	ENST00000474144	PRR9	Q5T870	116 aa		13.91	□□□□□ -0.18
TMEM54-204	ENST00000474144	ALG5	Q9Y673	324 aa		13.91	□□□□□ -0.18
TMEM54-204	ENST00000474144	PRSS29P	A6NIE9	313 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	OR7C2	O60412	319 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	CRISP2	P16562	243 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	HOXA5	P20719	270 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	OR5I1	Q13606	314 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	SCGB1C1	Q8TD33	95 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	ATG101	Q9BSB4	218 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	GSN-AS1	Q9NRJ2	163 aa		13.9	□□□□□ -0.18
TMEM54-204	ENST00000474144	PKHD1	P08F94	4074 aa		13.9	□□□□□ -0.19
TMEM54-204	ENST00000474144	IFNA5	P01569	189 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	GPX1	P07203	203 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	RAN	P62826	216 aa	Known RBP	13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	TMEM78	Q5T7P6	136 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144		Q6ZTI0	123 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	ZFAND2A	Q8N6M9	145 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	C11orf72	Q8NBR9	251 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	ZNF492	Q9P255	531 aa		13.89	□□□□□ -0.19
TMEM54-204	ENST00000474144	TRAV26-1	A0A087WT03	109 aa		13.88	□□□□□ -0.19
TMEM54-204	ENST00000474144		A0A0J9YY99	117 aa		13.88	□□□□□ -0.19
TMEM54-204	ENST00000474144		Q8TAT8	98 aa		13.88	□□□□□ -0.19
TMEM54-204	ENST00000474144	TP53TG3	Q9ULZ0	132 aa		13.88	□□□□□ -0.19
TMEM54-204	ENST00000474144	DNAH11	Q96DT5	4516 aa		13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144	UBE2L3	P68036	154 aa	Known RBP	13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144	DAZ2	Q13117	558 aa	Known RBP	13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144	LINC00467	Q9BRT7	94 aa		13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144		Q9H3A6	140 aa		13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144	TMPRSS5	Q9H3S3	457 aa		13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144	LINC00588	Q9Y4M8	146 aa		13.87	□□□□□ -0.19
TMEM54-204	ENST00000474144	FAM3B	P58499	235 aa	Predicted RBP	13.86	□□□□□ -0.19
TMEM54-204	ENST00000474144	EIF4E3	Q8N5X7	224 aa	Known RBP	13.86	□□□□□ -0.19
TMEM54-204	ENST00000474144	ZNRF2	Q8NHG8	242 aa		13.86	□□□□□ -0.19
TMEM54-204	ENST00000474144	KLF12	Q9Y4X4	402 aa		13.86	□□□□□ -0.19
TMEM54-204	ENST00000474144	NMB	P08949	121 aa		13.85	□□□□□ -0.19
TMEM54-204	ENST00000474144	ZNF138	P52744	262 aa		13.85	□□□□□ -0.19
TMEM54-204	ENST00000474144	ANXA2R	Q3ZCQ2	193 aa		13.85	□□□□□ -0.19
TMEM54-204	ENST00000474144	KHDC3L	Q587J8	217 aa		13.85	□□□□□ -0.19
TMEM54-204	ENST00000474144	ZNF680	Q8NEM1	530 aa		13.85	□□□□□ -0.19
TMEM54-204	ENST00000474144	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.85	□□□□□ -0.19
TMEM54-204	ENST00000474144	M6PR	P20645	277 aa		13.84	□□□□□ -0.19
TMEM54-204	ENST00000474144	CCL18	P55774	89 aa		13.84	□□□□□ -0.19
TMEM54-204	ENST00000474144	TAS2R45	P59539	299 aa		13.84	□□□□□ -0.19
TMEM54-204	ENST00000474144	LYPD1	Q8N2G4	141 aa		13.84	□□□□□ -0.19
TMEM54-204	ENST00000474144	TRGV1	A0A0A0MS02	117 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	DIRC3	C9JPN6	131 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	RGS13	O14921	159 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	CSN1S1	P47710	185 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	RAB2A	P61019	212 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	C1orf134	Q5TEV5	83 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	SSX7	Q7RTT5	188 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	RXFP4	Q8TDU9	374 aa		13.83	□□□□□ -0.2
TMEM54-204	ENST00000474144	TRGV2	A0A075B6R0	118 aa		13.82	□□□□□ -0.2
TMEM54-204	ENST00000474144	IGHV1OR15-1	A0A075B7D0	117 aa		13.82	□□□□□ -0.2
TMEM54-204	ENST00000474144	PTTG1	O95997	202 aa		13.82	□□□□□ -0.2
TMEM54-204	ENST00000474144	TCL1A	P56279	114 aa		13.82	□□□□□ -0.2
TMEM54-204	ENST00000474144	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.82	□□□□□ -0.2
TMEM54-204	ENST00000474144	HYLS1	Q96M11	299 aa		13.82	□□□□□ -0.2
TMEM54-204	ENST00000474144	NBDY	A0A0U1RRE5	68 aa		13.81	□□□□□ -0.2
TMEM54-204	ENST00000474144	RBAKDN	A6NC62	111 aa		13.81	□□□□□ -0.2
TMEM54-204	ENST00000474144	HMGB3	O15347	200 aa	Known RBP	13.81	□□□□□ -0.2
TMEM54-204	ENST00000474144	SPINK4	O60575	86 aa		13.81	□□□□□ -0.2

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