RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 MGAMO43451 1857 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 MFSD11O43934 449 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 SAA1P0DJI8 122 aaPredicted RBP0.34□□□□□ -2.36
CLCC1-208ENST00000473062 SERPINB1P30740 379 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 SRP9P49458 86 aaKnown RBP0.34□□□□□ -2.36
CLCC1-208ENST00000473062 TAS2R41P59536 307 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 DNAJB13P59910 316 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 NEDD8Q15843 81 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 XAF1Q6GPH4 301 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 C3orf33Q6P1S2 294 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 C3orf62Q6ZUJ4 267 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 CCDC32Q9BV29 185 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 UFC1Q9Y3C8 167 aa0.34□□□□□ -2.36
CLCC1-208ENST00000473062 TRAPPC8Q9Y2L5 1435 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 FAM107AO95990 144 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 CSN2P05814 226 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 RPS3P23396 243 aaKnown RBP eCLIP0.33□□□□□ -2.36
CLCC1-208ENST00000473062 LTC4SQ16873 150 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 TRIQKQ629K1 86 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 SPINK6Q6UWN8 80 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 IZUMO2Q6UXV1 221 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 TMEM229BQ8NBD8 167 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 OR5H6Q8NGV6 325 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 CCL4L1Q8NHW4 92 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 DIRC1Q969H9 104 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 C19orf12Q9NSK7 152 aa0.33□□□□□ -2.36
CLCC1-208ENST00000473062 PHRF1Q9P1Y6 1649 aaKnown RBP0.32□□□□□ -2.36
CLCC1-208ENST00000473062 C3orf85A0A1B0GTC6 90 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 PGRMC1O00264 195 aaKnown RBP0.32□□□□□ -2.36
CLCC1-208ENST00000473062 BCL2P10415 239 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 FABP2P12104 132 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 SDC2P34741 201 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 LYG2Q86SG7 212 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 ANGPTL5Q86XS5 388 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 SMIM20Q8N5G0 67 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 TCTEX1D1Q8N7M0 179 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 PRELID3AQ96N28 172 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 ATPIF1Q9UII2 106 aa0.32□□□□□ -2.36
CLCC1-208ENST00000473062 MYO5AQ9Y4I1 1855 aaKnown RBP0.32□□□□□ -2.36
CLCC1-208ENST00000473062 PIK3C2AO00443 1686 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 COL24A1Q17RW2 1714 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 FRAS1Q86XX4 4008 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 A0A1W2PPB8 328 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 A0A1W2PRS3 328 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 KIR3DP1A8MWS1 328 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 EVI2AP22794 236 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 SNRPD3P62318 126 aaKnown RBP0.31□□□□□ -2.36
CLCC1-208ENST00000473062 DCUN1D2Q6PH85 259 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 LXNQ9BS40 222 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 FAM103A1Q9BTL3 118 aaKnown RBP0.31□□□□□ -2.36
CLCC1-208ENST00000473062 LRTM1Q9HBL6 345 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 OTORQ9NRC9 128 aa0.31□□□□□ -2.36
CLCC1-208ENST00000473062 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.3□□□□□ -2.36
CLCC1-208ENST00000473062 LOC107986453A0A1B0GWG9 222 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 TRDV1A0A1B0GX56 115 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 MAP1LC3B2A6NCE7 125 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 IFITM5A6NNB3 132 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 E7EQ34 232 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 GLRXP35754 106 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 MAXP61244 160 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 MRPL35Q9NZE8 188 aaKnown RBP0.3□□□□□ -2.36
CLCC1-208ENST00000473062 MPC1Q9Y5U8 109 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 BDP1A6H8Y1 2624 aa0.3□□□□□ -2.36
CLCC1-208ENST00000473062 ZCCHC23Q6ZST2 131 aa0.29□□□□□ -2.36
CLCC1-208ENST00000473062 LIMD2Q9BT23 127 aa0.29□□□□□ -2.36
CLCC1-208ENST00000473062 GID8Q9NWU2 228 aa0.29□□□□□ -2.36
CLCC1-208ENST00000473062 FANCMQ8IYD8 2048 aa0.29□□□□□ -2.36
CLCC1-208ENST00000473062 FRMPD1Q5SYB0 1578 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 KMT2DO14686 5537 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 TRBV27A0A0K0K1C4 114 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 HIGD1CA8MV81 97 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 ETV6P41212 452 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 LINC00305Q7Z4B0 112 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 OR8J3Q8NGG0 315 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 CLEC2BQ92478 149 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 DSPPQ9NZW4 1301 aa0.28□□□□□ -2.36
CLCC1-208ENST00000473062 GABARAPH6UMI1 98 aa0.27□□□□□ -2.37
CLCC1-208ENST00000473062 TRAV13-1A0A0B4J241 112 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 TMEM189A5PLL7 270 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 TMEM238C9JI98 176 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 H3BMG7 143 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 IGF2P01344 180 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 S100A11P31949 105 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 DEFB132Q7Z7B7 95 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 CDC26Q8NHZ8 85 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 SMIM7Q9BQ49 75 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 V9GYQ6 96 aa0.26□□□□□ -2.37
CLCC1-208ENST00000473062 TECPR2O15040 1411 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 TRBV7-6A0A0J9YX20 115 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 TMEM30CPA0ZSE6 113 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 SDC4P31431 198 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 GTF2A1P52655 376 aaPredicted RBP0.25□□□□□ -2.37
CLCC1-208ENST00000473062 CRYBA4P53673 196 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 ASB16-AS1Q495Z4 193 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 GLYATL3Q5SZD4 288 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 TMEM78Q5T7P6 136 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 STX12Q86Y82 276 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 PPP1R1CQ8WVI7 109 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 CARD19Q96LW7 228 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms