RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 PKD1P98161 4303 aa10.31□□□□□ -0.76
ABCF3-209ENST00000472608 SMIM9A6NGZ8 99 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 UMAD1C9J7I0 102 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 BOLA2-SMG1P6H3BVE0 249 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 TSPOP30536 169 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 FAM74A1Q5RGS3 127 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 RXFP4Q8TDU9 374 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 PHLDA1Q8WV24 401 aaPredicted RBP10.3□□□□□ -0.76
ABCF3-209ENST00000472608 Q9H3A6 140 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 OTORQ9NRC9 128 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 PPP1R14DQ9NXH3 145 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 X6R8D5 127 aa10.3□□□□□ -0.76
ABCF3-209ENST00000472608 A0A1B0GVG6 124 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 RBAKDNA6NC62 111 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 HMGB3O15347 200 aaKnown RBP10.29□□□□□ -0.76
ABCF3-209ENST00000472608 CRXO43186 299 aaPredicted RBP10.29□□□□□ -0.76
ABCF3-209ENST00000472608 SLC25A5P05141 298 aaKnown RBP10.29□□□□□ -0.76
ABCF3-209ENST00000472608 TPT1P13693 172 aaKnown RBP10.29□□□□□ -0.76
ABCF3-209ENST00000472608 GCHFRP30047 84 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 CDKN1BP46527 198 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 CSN1S1P47710 185 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 FXYD7P58549 80 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 C9orf47Q6ZRZ4 202 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 Q8NAQ8 132 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 GOLT1BQ9Y3E0 138 aa10.29□□□□□ -0.76
ABCF3-209ENST00000472608 M0R2Z0 102 aa10.28□□□□□ -0.76
ABCF3-209ENST00000472608 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
ABCF3-209ENST00000472608 ZNF726P1Q15940 193 aa10.28□□□□□ -0.76
ABCF3-209ENST00000472608 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
ABCF3-209ENST00000472608 EIF5AL1Q6IS14 154 aaKnown RBP10.28□□□□□ -0.76
ABCF3-209ENST00000472608 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
ABCF3-209ENST00000472608 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
ABCF3-209ENST00000472608 C20orf144Q9BQM9 153 aa10.28□□□□□ -0.76
ABCF3-209ENST00000472608 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 PGPA6NDG6 321 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 INSP01308 110 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 NMBP08949 121 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 CT45A10P0DMU9 189 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 LEPP41159 167 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 SSX7Q7RTT5 188 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 SLC51BQ86UW2 128 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 TMEM256Q8N2U0 113 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 AGPAT4-IT1Q9H0P7 198 aa10.27□□□□□ -0.77
ABCF3-209ENST00000472608 A0A1W2PRE2 83 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 DIRC3C9JPN6 131 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 CMTM2Q8TAZ6 248 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 TMED6Q8WW62 240 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 FAM19A4Q96LR4 140 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 LENEPQ9Y5L5 61 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 HERC1Q15751 4861 aa10.26□□□□□ -0.77
ABCF3-209ENST00000472608 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 SERTM2A0A1B0GWG4 89 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 RBMY1A1P0DJD3 496 aaKnown RBP10.25□□□□□ -0.77
ABCF3-209ENST00000472608 RBMY1CP0DJD4 496 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 CRISP2P16562 243 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 RAB5CP51148 216 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 TCTAP57738 103 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 CD300CQ08708 224 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 RBMY1FQ15415 496 aaKnown RBP10.25□□□□□ -0.77
ABCF3-209ENST00000472608 MBD3L1Q8WWY6 194 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 NKX6-2Q9C056 277 aaPredicted RBP10.25□□□□□ -0.77
ABCF3-209ENST00000472608 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 ZNF492Q9P255 531 aa10.25□□□□□ -0.77
ABCF3-209ENST00000472608 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
ABCF3-209ENST00000472608 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
ABCF3-209ENST00000472608 HBE1P02100 147 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 PRB4P10163 310 aaPredicted RBP10.24□□□□□ -0.77
ABCF3-209ENST00000472608 ZNF138P52744 262 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 ERCC8Q13216 396 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 C5orf17Q8NAS9 161 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 VGLL1Q99990 258 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 TMEM208Q9BTX3 173 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 MAP1LC3BQ9GZQ8 125 aa10.24□□□□□ -0.77
ABCF3-209ENST00000472608 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
ABCF3-209ENST00000472608 IGHV3OR16-12A0A075B7B8 117 aa10.23□□□□□ -0.77
ABCF3-209ENST00000472608 KLLNB2CW77 178 aa10.23□□□□□ -0.77
ABCF3-209ENST00000472608 H7BYZ3 331 aa10.23□□□□□ -0.77
ABCF3-209ENST00000472608 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
ABCF3-209ENST00000472608 ARL2-SNX15V9GYD0 113 aa10.23□□□□□ -0.77
ABCF3-209ENST00000472608 FHITP49789 147 aa10.22□□□□□ -0.77
ABCF3-209ENST00000472608 TAS2R60P59551 318 aa10.22□□□□□ -0.77
ABCF3-209ENST00000472608 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
ABCF3-209ENST00000472608 GFI1BQ5VTD9 330 aa10.22□□□□□ -0.77
ABCF3-209ENST00000472608 C11orf45Q8TAV5 145 aa10.22□□□□□ -0.77
ABCF3-209ENST00000472608 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
ABCF3-209ENST00000472608 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.77
ABCF3-209ENST00000472608 FBLL1A6NHQ2 334 aaKnown RBP10.21□□□□□ -0.77
ABCF3-209ENST00000472608 GGTLC3B5MD39 225 aa10.21□□□□□ -0.77
ABCF3-209ENST00000472608 DEFB4AO15263 64 aa10.21□□□□□ -0.77
ABCF3-209ENST00000472608 SULT1A2P50226 295 aa10.21□□□□□ -0.77
ABCF3-209ENST00000472608 FGF8P55075 233 aaPredicted RBP10.21□□□□□ -0.77
ABCF3-209ENST00000472608 KIR3DS1Q14943 382 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms