RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 FFAR4Q5NUL3 377 aa16.47■□□□□ 0.23
RNF220-208ENST00000471494 FAM122CQ6P4D5 195 aa16.47■□□□□ 0.23
RNF220-208ENST00000471494 LINC00336Q6ZUF6 198 aa16.47■□□□□ 0.23
RNF220-208ENST00000471494 RNF141Q8WVD5 230 aa16.47■□□□□ 0.23
RNF220-208ENST00000471494 AGPAT4-IT1Q9H0P7 198 aa16.47■□□□□ 0.23
RNF220-208ENST00000471494 IGLV2-18A0A075B6J9 118 aa16.46■□□□□ 0.23
RNF220-208ENST00000471494 IGKV2-40A0A087WW87 121 aaPredicted RBP16.46■□□□□ 0.23
RNF220-208ENST00000471494 IGKV2D-40P01614 121 aaPredicted RBP16.46■□□□□ 0.23
RNF220-208ENST00000471494 LGALS9BQ3B8N2 356 aa16.46■□□□□ 0.23
RNF220-208ENST00000471494 TMEM78Q5T7P6 136 aa16.46■□□□□ 0.23
RNF220-208ENST00000471494 FXYD5Q96DB9 178 aa16.46■□□□□ 0.23
RNF220-208ENST00000471494 C9orf47Q6ZRZ4 202 aa16.45■□□□□ 0.22
RNF220-208ENST00000471494 ATG101Q9BSB4 218 aa16.45■□□□□ 0.22
RNF220-208ENST00000471494 KLLNB2CW77 178 aa16.44■□□□□ 0.22
RNF220-208ENST00000471494 NUDT3O95989 172 aa16.44■□□□□ 0.22
RNF220-208ENST00000471494 UBE2L3P68036 154 aaKnown RBP16.44■□□□□ 0.22
RNF220-208ENST00000471494 BTN1A1Q13410 526 aa16.44■□□□□ 0.22
RNF220-208ENST00000471494 PHYHIPLQ96FC7 376 aa16.44■□□□□ 0.22
RNF220-208ENST00000471494 FAM19A4Q96LR4 140 aa16.44■□□□□ 0.22
RNF220-208ENST00000471494 ALG5Q9Y673 324 aa16.44■□□□□ 0.22
RNF220-208ENST00000471494 GAGE12BA1L429 117 aa16.43■□□□□ 0.22
RNF220-208ENST00000471494 GAGE7O76087 117 aa16.43■□□□□ 0.22
RNF220-208ENST00000471494 GAGE12FP0CL80 117 aa16.43■□□□□ 0.22
RNF220-208ENST00000471494 GAGE12GP0CL81 117 aa16.43■□□□□ 0.22
RNF220-208ENST00000471494 GAGE12IP0CL82 117 aa16.43■□□□□ 0.22
RNF220-208ENST00000471494 LINC00612Q8N6U2 182 aa16.43■□□□□ 0.22
RNF220-208ENST00000471494 PTTG1O95997 202 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 GPX1P07203 203 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 CRISP2P16562 243 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 RNASE4P34096 147 aaKnown RBP16.42■□□□□ 0.22
RNF220-208ENST00000471494 FAM3BP58499 235 aaPredicted RBP16.42■□□□□ 0.22
RNF220-208ENST00000471494 TAS2R45P59539 299 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 CD300CQ08708 224 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 KHDC3LQ587J8 217 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 ZNF680Q8NEM1 530 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 VGLL1Q99990 258 aa16.42■□□□□ 0.22
RNF220-208ENST00000471494 NMBP08949 121 aa16.41■□□□□ 0.22
RNF220-208ENST00000471494 CSN1S1P47710 185 aa16.41■□□□□ 0.22
RNF220-208ENST00000471494 RANP62826 216 aaKnown RBP16.4■□□□□ 0.22
RNF220-208ENST00000471494 DAZ2Q13117 558 aaKnown RBP16.4■□□□□ 0.22
RNF220-208ENST00000471494 OR5I1Q13606 314 aa16.4■□□□□ 0.22
RNF220-208ENST00000471494 LYPD1Q8N2G4 141 aa16.4■□□□□ 0.22
RNF220-208ENST00000471494 EIF4E3Q8N5X7 224 aaKnown RBP16.4■□□□□ 0.22
RNF220-208ENST00000471494 ZNF503Q96F45 646 aa16.4■□□□□ 0.22
RNF220-208ENST00000471494 ZNF492Q9P255 531 aa16.4■□□□□ 0.22
RNF220-208ENST00000471494 ZNF324O75467 553 aaPredicted RBP16.39■□□□□ 0.21
RNF220-208ENST00000471494 ZNF138P52744 262 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 Q6ZR54 194 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 ZFAND2AQ8N6M9 145 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 LINC00467Q9BRT7 94 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 Q9H3A6 140 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 WFDC1Q9HC57 220 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 GSN-AS1Q9NRJ2 163 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 HECTD4Q9Y4D8 3996 aa16.39■□□□□ 0.21
RNF220-208ENST00000471494 RTL8CO15255 209 aa16.38■□□□□ 0.21
RNF220-208ENST00000471494 Q8TAT8 98 aa16.38■□□□□ 0.21
RNF220-208ENST00000471494 GNPNAT1Q96EK6 184 aaPredicted RBP16.38■□□□□ 0.21
RNF220-208ENST00000471494 PRSS29PA6NIE9 313 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 RGS13O14921 159 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 M6PRP20645 277 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 CCL18P55774 89 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 ACOT6Q3I5F7 207 aaPredicted RBP16.37■□□□□ 0.21
RNF220-208ENST00000471494 ANXA2RQ3ZCQ2 193 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 SOHLH1Q5JUK2 328 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 PRR9Q5T870 116 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 Q6ZTI0 123 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 C11orf72Q8NBR9 251 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 MED28Q9H204 178 aa16.37■□□□□ 0.21
RNF220-208ENST00000471494 TRAV26-1A0A087WT03 109 aa16.36■□□□□ 0.21
RNF220-208ENST00000471494 RBAKDNA6NC62 111 aa16.36■□□□□ 0.21
RNF220-208ENST00000471494 TMPRSS5Q9H3S3 457 aa16.36■□□□□ 0.21
RNF220-208ENST00000471494 TRBV7-9A0A0J9YWB2 115 aa16.35■□□□□ 0.21
RNF220-208ENST00000471494 A0A1W2PPV4 95 aa16.35■□□□□ 0.21
RNF220-208ENST00000471494 EIF3GO75821 320 aaKnown RBP eCLIP16.35■□□□□ 0.21
RNF220-208ENST00000471494 HOXA5P20719 270 aa16.35■□□□□ 0.21
RNF220-208ENST00000471494 TRGV2A0A075B6R0 118 aa16.34■□□□□ 0.21
RNF220-208ENST00000471494 TRGV1A0A0A0MS02 117 aa16.34■□□□□ 0.21
RNF220-208ENST00000471494 A0A0J9YY99 117 aa16.34■□□□□ 0.21
RNF220-208ENST00000471494 RXFP4Q8TDU9 374 aa16.34■□□□□ 0.21
RNF220-208ENST00000471494 ARPC5LQ9BPX5 153 aa16.34■□□□□ 0.21
RNF220-208ENST00000471494 MUC4Q99102 2169 aa16.34■□□□□ 0.21
RNF220-208ENST00000471494 IGHV1OR15-1A0A075B7D0 117 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 TCL1AP56279 114 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 RAB2AP61019 212 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 ZNF266Q14584 549 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 IBA57Q5T440 356 aaKnown RBP16.33■□□□□ 0.2
RNF220-208ENST00000471494 PQLC2Q6ZP29 291 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 ZNRF2Q8NHG8 242 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 CMTM2Q8TAZ6 248 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 HYLS1Q96M11 299 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 OTORQ9NRC9 128 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 DNAH2Q9P225 4427 aa16.33■□□□□ 0.2
RNF220-208ENST00000471494 A0A1B0GVY2 172 aa16.32■□□□□ 0.2
RNF220-208ENST00000471494 DIRC3C9JPN6 131 aa16.32■□□□□ 0.2
RNF220-208ENST00000471494 FAM74A1Q5RGS3 127 aa16.32■□□□□ 0.2
RNF220-208ENST00000471494 C1orf134Q5TEV5 83 aa16.32■□□□□ 0.2
RNF220-208ENST00000471494 LINC00588Q9Y4M8 146 aa16.32■□□□□ 0.2
RNF220-208ENST00000471494 KLF12Q9Y4X4 402 aa16.32■□□□□ 0.2
RNF220-208ENST00000471494 Q6ZQT7 251 aa16.31■□□□□ 0.2
RNF220-208ENST00000471494 SSX7Q7RTT5 188 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms