RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 HLA-DRB4X5D2U9 266 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 AGRNO00468 2067 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 RAB19A4D1S5 217 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 DNASE2O00115 360 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-207ENST00000471342 PEX7O00628 323 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 CRISP2P16562 243 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 S100A7P31151 101 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 FOXI2Q6ZQN5 318 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 GOLT1AQ6ZVE7 132 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 SLC7A5P1Q8MH63 180 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 CLEC5AQ9NY25 188 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
SF3A1-207ENST00000471342 KLLNB2CW77 178 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 OR11H12B2RN74 326 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 ZNF324O75467 553 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-207ENST00000471342 LTAP01374 205 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 SLC25A5P05141 298 aaKnown RBP7.22□□□□□ -1.25
SF3A1-207ENST00000471342 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 PPT1P50897 306 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 PAFAH1B2P68402 229 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 TMEM183BQ1AE95 376 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 CST9LP1Q5W188 147 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 CYB561D1Q8N8Q1 229 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 Q8TAT8 98 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 TXNDC17Q9BRA2 123 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 ATG101Q9BSB4 218 aa7.22□□□□□ -1.25
SF3A1-207ENST00000471342 PGPEP1LA6NFU8 196 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 TMEM250H0YL14 139 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 K7EN84 100 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 ACTL10Q5JWF8 245 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 SAMD13Q5VXD3 122 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 IQCF2Q8IXL9 164 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 C1orf158Q8N1D5 194 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 TMEM75Q8N9X5 138 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 ZNF738Q8NE65 137 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 HIST1H2BAQ96A08 127 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 TCEAL7Q9BRU2 100 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 NKX6-2Q9C056 277 aaPredicted RBP7.21□□□□□ -1.26
SF3A1-207ENST00000471342 SLC35B3Q9H1N7 401 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 PARLQ9H300 379 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 PSG8Q9UQ74 426 aa7.21□□□□□ -1.26
SF3A1-207ENST00000471342 ID1P41134 155 aa7.2□□□□□ -1.26
SF3A1-207ENST00000471342 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
SF3A1-207ENST00000471342 SNRPD3P62318 126 aaKnown RBP7.2□□□□□ -1.26
SF3A1-207ENST00000471342 Q86TA4 180 aa7.2□□□□□ -1.26
SF3A1-207ENST00000471342 COMMD7Q86VX2 200 aa7.2□□□□□ -1.26
SF3A1-207ENST00000471342 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
SF3A1-207ENST00000471342 C8orf49Q96NF6 230 aa7.2□□□□□ -1.26
SF3A1-207ENST00000471342 ODF3Q96PU9 254 aa7.2□□□□□ -1.26
SF3A1-207ENST00000471342 DYNC2H1Q8NCM8 4307 aaKnown RBP7.19□□□□□ -1.26
SF3A1-207ENST00000471342 TRBV7-9A0A0J9YWB2 115 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 TMEM218A2RU14 115 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 C19orf71A6NCJ1 209 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 PDE6DO43924 150 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 PRM2P04554 102 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 TAGLN2P37802 199 aaKnown RBP7.19□□□□□ -1.26
SF3A1-207ENST00000471342 OCC1Q8TAD7 63 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 ZC2HC1AQ96GY0 325 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 SMDT1Q9H4I9 107 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 AAMDCQ9H7C9 122 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 SRD5A3Q9H8P0 318 aa7.19□□□□□ -1.26
SF3A1-207ENST00000471342 SERTM2A0A1B0GWG4 89 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 F6UZH7 168 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 M0R2Z0 102 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 IGKV3-20P01619 116 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 ZNF138P52744 262 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
SF3A1-207ENST00000471342 TAS2R60P59551 318 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 RAB14P61106 215 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 FLI1Q01543 452 aaPredicted RBP7.18□□□□□ -1.26
SF3A1-207ENST00000471342 HIST1H1AQ02539 215 aaPredicted RBP7.18□□□□□ -1.26
SF3A1-207ENST00000471342 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 TENM3Q9P273 2699 aa7.18□□□□□ -1.26
SF3A1-207ENST00000471342 DNAH7Q8WXX0 4024 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 PLAC8L1A1L4L8 177 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 C9JCJ5 164 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 GCGP01275 180 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 FXYD7P58549 80 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 BTN1A1Q13410 526 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 GFI1BQ5VTD9 330 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 Q6AWC8 147 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 ZNF705AQ6ZN79 300 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-207ENST00000471342 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 EIF5A2Q9GZV4 153 aaKnown RBP7.17□□□□□ -1.26
SF3A1-207ENST00000471342 SDF2L1Q9HCN8 221 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 RPH3ALQ9UNE2 315 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 LENEPQ9Y5L5 61 aa7.17□□□□□ -1.26
SF3A1-207ENST00000471342 TRAV12-2A0A075B6T6 113 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 IGKV3D-20A0A0C4DH25 116 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 IFNA1P01562 189 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 SFTA3P0C7M3 94 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 FRMD6-AS1P0C7T7 363 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 RPL35AP18077 110 aaKnown RBP7.16□□□□□ -1.26
SF3A1-207ENST00000471342 PEA15Q15121 130 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 SPINK13Q1W4C9 94 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 ZNF674Q2M3X9 581 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 CENPWQ5EE01 88 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 PRNTQ86SH4 94 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms