RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 SPXQ9BT56 116 aa4.53□□□□□ -1.68
SF3A3-205ENST00000470585 CHAC1Q9BUX1 264 aa4.53□□□□□ -1.68
SF3A3-205ENST00000470585 GGACTQ9BVM4 153 aa4.53□□□□□ -1.68
SF3A3-205ENST00000470585 ARV1Q9H2C2 271 aa4.53□□□□□ -1.68
SF3A3-205ENST00000470585 NPVFQ9HCQ7 196 aa4.53□□□□□ -1.68
SF3A3-205ENST00000470585 EXTL2Q9UBQ6 330 aa4.53□□□□□ -1.68
SF3A3-205ENST00000470585 RCL1Q9Y2P8 373 aaKnown RBP4.53□□□□□ -1.68
SF3A3-205ENST00000470585 A0A087WXM4 84 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 TRGV4A0A0C4DH28 118 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 PRAF2O60831 178 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 IGLV2-11P01706 119 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 OR4E1P0C645 316 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 GATA2P23769 480 aaPredicted RBP4.52□□□□□ -1.69
SF3A3-205ENST00000470585 TGFBR1P36897 503 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 TAS2R30P59541 319 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 HAMPP81172 84 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 KIR3DS1Q14943 382 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 CLVS1Q8IUQ0 354 aaPredicted RBP4.52□□□□□ -1.69
SF3A3-205ENST00000470585 TMEM37Q8WXS4 190 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 RASL10AQ92737 203 aa4.52□□□□□ -1.69
SF3A3-205ENST00000470585 PAIP2BQ9ULR5 123 aaKnown RBP4.52□□□□□ -1.69
SF3A3-205ENST00000470585 TRAV8-3A0A0A6YYJ7 113 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 TRAV8-6A0A0B4J262 113 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 ANKRD20A5PA0PJZ0 165 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 GOSR2O14653 212 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 RGS13O14921 159 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 PFN1P07737 140 aaKnown RBP4.51□□□□□ -1.69
SF3A3-205ENST00000470585 HOXB5P09067 269 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 IAPPP10997 89 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 TNFSF8P32971 234 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 FAUP35544 74 aaKnown RBP4.51□□□□□ -1.69
SF3A3-205ENST00000470585 ZNF846Q147U1 533 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 TOR2AQ5JU69 321 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 SPANXN5Q5MJ07 72 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 PATE2Q6UY27 113 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 C9orf47Q6ZRZ4 202 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 SCXQ7RTU7 201 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 LINC00305Q7Z4B0 112 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 C12orf45Q8N5I9 185 aaPredicted RBP4.51□□□□□ -1.69
SF3A3-205ENST00000470585 C8orf49Q96NF6 230 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 ARPC5LQ9BPX5 153 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 SLC25A31Q9H0C2 315 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 ARL6Q9H0F7 186 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 MGAT4CQ9UBM8 478 aa4.51□□□□□ -1.69
SF3A3-205ENST00000470585 IGHV1OR15-1A0A075B7D0 117 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 TRAV4A0A0B4J268 109 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 LINC00854A0A1B0GVQ3 168 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 SMCO3A2RU48 225 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 FABP12A6NFH5 140 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 PRAC2D3DTV9 90 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 COX7A2P2O60397 106 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 SEC11BP0C7V7 166 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 HIST1H1EP10412 219 aaKnown RBP4.5□□□□□ -1.69
SF3A3-205ENST00000470585 GYPEP15421 78 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 UBE2MP61081 183 aaKnown RBP4.5□□□□□ -1.69
SF3A3-205ENST00000470585 LSM3P62310 102 aaKnown RBP4.5□□□□□ -1.69
SF3A3-205ENST00000470585 ID3Q02535 119 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 OPCMLQ14982 345 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 Q8N976 141 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 OR10P1Q8NGE3 313 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 BLNKQ8WV28 456 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 SMIM8Q96KF7 97 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 PFDN5Q99471 154 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 SLC25A21Q9BQT8 299 aaPredicted RBP4.5□□□□□ -1.69
SF3A3-205ENST00000470585 FUNDC2Q9BWH2 189 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 SRRQ9GZT4 340 aa4.5□□□□□ -1.69
SF3A3-205ENST00000470585 E5RGE8 158 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 SLC17A3O00476 420 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 TSC22D2O75157 780 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 GPX1P07203 203 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 PPT1P50897 306 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 AP3S2P59780 193 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 VBP1P61758 197 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 NCS1P62166 190 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 RAB31Q13636 194 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 TMEM78Q5T7P6 136 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 LELP1Q5T871 98 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 C10orf113Q5VZT2 155 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 FAAP20Q6NZ36 180 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 TMEM14EPQ6UXP3 125 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 Q6ZRG5 221 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 Q6ZRU5 148 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 ZFAND2AQ8N6M9 145 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 OR1L4Q8NGR5 311 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 CHAC2Q8WUX2 184 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 RMI2Q96E14 147 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 PAXXQ9BUH6 204 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 PARD6GQ9BYG4 376 aaPredicted RBP4.49□□□□□ -1.69
SF3A3-205ENST00000470585 DNAJC4Q9NNZ3 241 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 MRPL16Q9NX20 251 aaKnown RBP4.49□□□□□ -1.69
SF3A3-205ENST00000470585 TMEM14CQ9P0S9 112 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 RSL24D1Q9UHA3 163 aaKnown RBP4.49□□□□□ -1.69
SF3A3-205ENST00000470585 LENEPQ9Y5L5 61 aa4.49□□□□□ -1.69
SF3A3-205ENST00000470585 LRP1Q07954 4544 aaKnown RBP4.49□□□□□ -1.69
SF3A3-205ENST00000470585 TRGV11A0A075B6L2 103 aa4.48□□□□□ -1.69
SF3A3-205ENST00000470585 TRBV19A0A075B6N1 114 aa4.48□□□□□ -1.69
SF3A3-205ENST00000470585 RBAKDNA6NC62 111 aa4.48□□□□□ -1.69
SF3A3-205ENST00000470585 H3BQ15 152 aa4.48□□□□□ -1.69
SF3A3-205ENST00000470585 AGPAT2O15120 278 aa4.48□□□□□ -1.69
SF3A3-205ENST00000470585 GHRHP01286 108 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms