RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 Q6AWC8 147 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 PATE2Q6UY27 113 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 C3orf56Q8N813 242 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 SPANXA2-OT1Q8N9U9 137 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 PSMF1Q92530 271 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 CHCHD1Q96BP2 118 aaKnown RBP2.41□□□□□ -2.02
COL11A1-208ENST00000470170 IMMP2LQ96T52 175 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 VAMP8Q9BV40 100 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 LINC00574Q9H8X3 128 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 RPL26L1Q9UNX3 145 aaKnown RBP2.41□□□□□ -2.02
COL11A1-208ENST00000470170 LSM2Q9Y333 95 aaKnown RBP2.41□□□□□ -2.02
COL11A1-208ENST00000470170 TPRKBQ9Y3C4 175 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 ABCC2Q92887 1545 aa2.41□□□□□ -2.02
COL11A1-208ENST00000470170 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.02
COL11A1-208ENST00000470170 PLXNB3Q9ULL4 1909 aa2.4□□□□□ -2.02
COL11A1-208ENST00000470170 ATAD5Q96QE3 1844 aa2.4□□□□□ -2.02
COL11A1-208ENST00000470170 PLA2R1Q13018 1463 aa2.4□□□□□ -2.02
COL11A1-208ENST00000470170 AHDC1Q5TGY3 1603 aaPredicted RBP2.4□□□□□ -2.03
COL11A1-208ENST00000470170 TRGV5A0A0B4J1U4 118 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 IGHV3-15A0A0B4J1V0 119 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 TMEM235A6NFC5 223 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 H3BPC8 53 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 M0R2P5 195 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 TIMM17BO60830 172 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 CKS2P33552 79 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 ETV6P41212 452 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 RPL28P46779 137 aaKnown RBP2.4□□□□□ -2.03
COL11A1-208ENST00000470170 FXYD2P54710 66 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 FOXA1P55317 472 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 ZNF117Q03924 483 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 LGALSLQ3ZCW2 172 aaPredicted RBP2.4□□□□□ -2.03
COL11A1-208ENST00000470170 ZNF660Q6AZW8 331 aaPredicted RBP2.4□□□□□ -2.03
COL11A1-208ENST00000470170 SLC35E3Q7Z769 313 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 DYNAPQ8N1N2 210 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 MUC7Q8TAX7 377 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 MRPS24Q96EL2 167 aaKnown RBP2.4□□□□□ -2.03
COL11A1-208ENST00000470170 PRO1933Q9H354 126 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 BCL2L10Q9HD36 194 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 ASF1BQ9NVP2 202 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 MED9Q9NWA0 146 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 BET1LQ9NYM9 111 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 LY96Q9Y6Y9 160 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 AKAP12Q02952 1782 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 NRKQ7Z2Y5 1582 aa2.4□□□□□ -2.03
COL11A1-208ENST00000470170 UNC79Q9P2D8 2635 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 SBF1O95248 1867 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 ANKRD31Q8N7Z5 1873 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 SHROOM2Q13796 1616 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 RNF17Q9BXT8 1623 aaKnown RBP2.39□□□□□ -2.03
COL11A1-208ENST00000470170 FANCMQ8IYD8 2048 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 CDK13Q14004 1512 aaKnown RBP2.39□□□□□ -2.03
COL11A1-208ENST00000470170 TRAV40A0A0B4J280 105 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 C17orf112F2Z3M2 114 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 G3V3Q6 166 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 IGHV3-53P01767 116 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 IGLV7-43P04211 117 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 CD3DP04234 171 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 CCL4P13236 92 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 PEBP1P30086 187 aaKnown RBP2.39□□□□□ -2.03
COL11A1-208ENST00000470170 SUPT4H1P63272 117 aaKnown RBP2.39□□□□□ -2.03
COL11A1-208ENST00000470170 ATP11AUNQ6ZP68 121 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 OR2T35Q8NGX2 323 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 OR5AK2Q8NH90 309 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 OTOSQ8NHW6 89 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 ATG5Q9H1Y0 275 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 TMEM106BQ9NUM4 274 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 KIAA1671Q9BY89 1806 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 COL1A1P02452 1464 aaPredicted RBP2.39□□□□□ -2.03
COL11A1-208ENST00000470170 RALGAPBQ86X10 1494 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 PDE4DIPQ5VU43 2346 aa2.39□□□□□ -2.03
COL11A1-208ENST00000470170 TARBP1Q13395 1621 aaKnown RBP2.39□□□□□ -2.03
COL11A1-208ENST00000470170 CUL9Q8IWT3 2517 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 ECM29Q5VYK3 1845 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 ZNF638Q14966 1978 aaKnown RBP2.38□□□□□ -2.03
COL11A1-208ENST00000470170 PIGBOS1A0A0B4J2F0 54 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 MDFIC2A0A1B0GVS7 189 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 C7orf66A4D0T2 115 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 A8MUU9 505 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 K7EM74 188 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 CPSF4O95639 269 aaKnown RBP2.38□□□□□ -2.03
COL11A1-208ENST00000470170 IL4P05112 153 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 NPC2P61916 151 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 FUT5Q11128 374 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 SS18Q15532 418 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 RIC1Q4ADV7 1423 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 NUP210LQ5VU65 1888 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 LYZL1Q6UWQ5 148 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 BRD3OSQ6XYD6 125 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 C2orf91Q6ZV80 131 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 Q8N2B8 174 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 VWDEQ8N2E2 1590 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 TMEM105Q8N8V8 129 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 AQP3Q92482 292 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 HYLS1Q96M11 299 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 RNF5Q99942 180 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 MAST2Q6P0Q8 1798 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 BRWD3Q6RI45 1802 aa2.38□□□□□ -2.03
COL11A1-208ENST00000470170 CACNA1GO43497 2377 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 KIAA1551Q9HCM1 1747 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 NCKAP5O14513 1909 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms