RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 TRAV8-3A0A0A6YYJ7 113 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 SMCO3A2RU48 225 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 HPGDSO60760 199 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 MED6O75586 246 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 OR4E1P0C645 316 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 IGLC2P0DOY2 106 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 SRPXP78539 464 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 Q8N976 141 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 OR51S1Q8NGJ8 323 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 BAALCQ8WXS3 180 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 RASL10AQ92737 203 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 VCX3BQ9H321 246 aa7.8□□□□□ -1.16
LSM2-209ENST00000470083 FAT4Q6V0I7 4981 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 DISC1C4P0D8 188 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 H3BQ15 152 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 K7EPK0 472 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 CRISP2P16562 243 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 ERCC8Q13216 396 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 OPCMLQ14982 345 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 NEDD8Q15843 81 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 SPANXN5Q5MJ07 72 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 PXDC1Q5TGL8 231 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 LINC00305Q7Z4B0 112 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 RAB26Q9ULW5 256 aa7.79□□□□□ -1.16
LSM2-209ENST00000470083 PIGBOS1A0A0B4J2F0 54 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 RNF222A6NCQ9 220 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 WRBO00258 174 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 SYNGR2O43760 224 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 GPX1P07203 203 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 NMBP08949 121 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 SLC25A6P12236 298 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 LSM3P62310 102 aaKnown RBP7.78□□□□□ -1.16
LSM2-209ENST00000470083 LELP1Q5T871 98 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 ATP6V0E2Q8NHE4 81 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 MRPL53Q96EL3 112 aaKnown RBP7.78□□□□□ -1.16
LSM2-209ENST00000470083 LINC00477Q96M19 166 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 STRAPQ9Y3F4 350 aaKnown RBP7.78□□□□□ -1.16
LSM2-209ENST00000470083 COX11Q9Y6N1 276 aa7.78□□□□□ -1.16
LSM2-209ENST00000470083 TRAV4A0A0B4J268 109 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 DUXBA0A1W2PPF3 345 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 FAM25AB3EWG3 89 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 FAM25CB3EWG5 89 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 FAM25GB3EWG6 89 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 H3BP45 60 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 PFN1P07737 140 aaKnown RBP7.77□□□□□ -1.17
LSM2-209ENST00000470083 ANXA3P12429 323 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 GUK1Q16774 197 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 PRR9Q5T870 116 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 Q6ZQT7 251 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 ZFAND2AQ8N6M9 145 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 PRRT1Q99946 306 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 AGPAT4-IT1Q9H0P7 198 aa7.77□□□□□ -1.17
LSM2-209ENST00000470083 M0R3E3 92 aa7.76□□□□□ -1.17
LSM2-209ENST00000470083 ZNF253O75346 499 aa7.76□□□□□ -1.17
LSM2-209ENST00000470083 SSBP1Q04837 148 aaKnown RBP7.76□□□□□ -1.17
LSM2-209ENST00000470083 TOR2AQ5JU69 321 aa7.76□□□□□ -1.17
LSM2-209ENST00000470083 Q8N3U1 123 aa7.76□□□□□ -1.17
LSM2-209ENST00000470083 C15orf40Q8WUR7 153 aa7.76□□□□□ -1.17
LSM2-209ENST00000470083 RPH3ALQ9UNE2 315 aa7.76□□□□□ -1.17
LSM2-209ENST00000470083 FABP12A6NFH5 140 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 GATA1P15976 413 aaPredicted RBP7.75□□□□□ -1.17
LSM2-209ENST00000470083 SLC38A11Q08AI6 406 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 ZNF546Q86UE3 836 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 OR4C5Q8NGB2 326 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 SPXQ9BT56 116 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 SRRQ9GZT4 340 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 EXTL2Q9UBQ6 330 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 MUC2Q02817 5179 aa7.75□□□□□ -1.17
LSM2-209ENST00000470083 COX7A2P2O60397 106 aa7.74□□□□□ -1.17
LSM2-209ENST00000470083 RMI2Q96E14 147 aa7.74□□□□□ -1.17
LSM2-209ENST00000470083 SCGB3A2Q96PL1 93 aa7.74□□□□□ -1.17
LSM2-209ENST00000470083 NPVFQ9HCQ7 196 aa7.74□□□□□ -1.17
LSM2-209ENST00000470083 TRAV8-1A0A0A6YYK1 113 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 FNDC10F2Z333 226 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 GOSR2O14653 212 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 AKAIN1P0CW23 69 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 POLR2GP62487 172 aaKnown RBP eCLIP7.73□□□□□ -1.17
LSM2-209ENST00000470083 ODF1Q14990 250 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 MZT2AQ6P582 158 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
LSM2-209ENST00000470083 HSD17B11Q8NBQ5 300 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 YIPF6Q96EC8 236 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 GTSF1LQ9H1H1 148 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
LSM2-209ENST00000470083 PRELID1Q9Y255 219 aa7.73□□□□□ -1.17
LSM2-209ENST00000470083 IGHV3-16A0A0C4DH30 117 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 A0A0D9SG52 128 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 GGTLC3B5MD39 225 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 RRAS2P62070 204 aaPredicted RBP7.72□□□□□ -1.17
LSM2-209ENST00000470083 MRPS10P82664 201 aaKnown RBP7.72□□□□□ -1.17
LSM2-209ENST00000470083 MUC21Q5SSG8 566 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 C10orf113Q5VZT2 155 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 FAM122CQ6P4D5 195 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 CLVS1Q8IUQ0 354 aaPredicted RBP7.72□□□□□ -1.17
LSM2-209ENST00000470083 DPH3P1Q9H4G8 78 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 RABL2BQ9UNT1 228 aa7.72□□□□□ -1.17
LSM2-209ENST00000470083 LPAP08519 4548 aa7.71□□□□□ -1.17
LSM2-209ENST00000470083 TRBV19A0A075B6N1 114 aa7.71□□□□□ -1.18
LSM2-209ENST00000470083 AGPAT2O15120 278 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms