RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ORM1P02763 201 aa12.66□□□□□ -0.38
NCKIPSD-209ENST00000470006 OR4E1P0C645 316 aa12.66□□□□□ -0.38
NCKIPSD-209ENST00000470006 CTF1Q16619 201 aa12.66□□□□□ -0.38
NCKIPSD-209ENST00000470006 MORN5Q5VZ52 161 aa12.66□□□□□ -0.38
NCKIPSD-209ENST00000470006 OR10P1Q8NGE3 313 aa12.66□□□□□ -0.38
NCKIPSD-209ENST00000470006 IGHV3-38A0A0C4DH36 116 aa12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 K7EPK0 472 aa12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 AGPAT2O15120 278 aa12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 GUK1Q16774 197 aa12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-209ENST00000470006 IGHV1OR15-1A0A075B7D0 117 aa12.64□□□□□ -0.39
NCKIPSD-209ENST00000470006 M0R3E3 92 aa12.64□□□□□ -0.39
NCKIPSD-209ENST00000470006 SFT2D2O95562 160 aa12.64□□□□□ -0.39
NCKIPSD-209ENST00000470006 PPT1P50897 306 aa12.64□□□□□ -0.39
NCKIPSD-209ENST00000470006 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
NCKIPSD-209ENST00000470006 C9JCJ5 164 aa12.63□□□□□ -0.39
NCKIPSD-209ENST00000470006 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-209ENST00000470006 ID3Q02535 119 aa12.63□□□□□ -0.39
NCKIPSD-209ENST00000470006 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
NCKIPSD-209ENST00000470006 NHLRC2Q8NBF2 726 aa12.63□□□□□ -0.39
NCKIPSD-209ENST00000470006 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
NCKIPSD-209ENST00000470006 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 FNDC10F2Z333 226 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 C4orf46Q504U0 113 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 Q6ZSA8 131 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 RAB2BQ8WUD1 216 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 SLC25A31Q9H0C2 315 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 DNAJC4Q9NNZ3 241 aa12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 RSL24D1Q9UHA3 163 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-209ENST00000470006 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
NCKIPSD-209ENST00000470006 Q6ZQT7 251 aa12.61□□□□□ -0.39
NCKIPSD-209ENST00000470006 Q6ZRG5 221 aa12.61□□□□□ -0.39
NCKIPSD-209ENST00000470006 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
NCKIPSD-209ENST00000470006 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
NCKIPSD-209ENST00000470006 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 TRAV8-6A0A0B4J262 113 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 LINC01556Q5JQF7 62 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 TMEM14EPQ6UXP3 125 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 MRPL53Q96EL3 112 aaKnown RBP12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 MGST2Q99735 147 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 TM2D2Q9BX73 214 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 SRRQ9GZT4 340 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 TIMM9Q9Y5J7 89 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 FAT3Q8TDW7 4589 aa12.6□□□□□ -0.39
NCKIPSD-209ENST00000470006 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 CRISP2P16562 243 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 OR10J3Q5JRS4 329 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 PRR9Q5T870 116 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 SCXQ7RTU7 201 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 OR10G4Q8NGN3 311 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 PRELID1Q9Y255 219 aa12.59□□□□□ -0.39
NCKIPSD-209ENST00000470006 LECT2O14960 151 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 ZNF253O75346 499 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 HIST1H1EP10412 219 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 TNFSF8P32971 234 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 RAB31Q13636 194 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 OR1L4Q8NGR5 311 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 SOSTQ9BQB4 213 aa12.58□□□□□ -0.4
NCKIPSD-209ENST00000470006 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 NMBP08949 121 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 CAMLGP49069 296 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 WFDC2Q14508 124 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 LINC01620Q4KN68 170 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 ZFAND2AQ8N6M9 145 aa12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 SLC25A21Q9BQT8 299 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-209ENST00000470006 AP3S2P59780 193 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 C12orf45Q8N5I9 185 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 PFDN5Q99471 154 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 AAMDCQ9H7C9 122 aa12.56□□□□□ -0.4
NCKIPSD-209ENST00000470006 FABP12A6NFH5 140 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 SPCS2Q15005 226 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 NRARPQ7Z6K4 114 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 TOMM5Q8N4H5 51 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 GGACTQ9BVM4 153 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
NCKIPSD-209ENST00000470006 TSC22D2O75157 780 aa12.54□□□□□ -0.4
NCKIPSD-209ENST00000470006 TIRAPP58753 221 aa12.54□□□□□ -0.4
NCKIPSD-209ENST00000470006 RASL10AQ92737 203 aa12.54□□□□□ -0.4
NCKIPSD-209ENST00000470006 SPXQ9BT56 116 aa12.54□□□□□ -0.4
NCKIPSD-209ENST00000470006 TRAV4A0A0B4J268 109 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms