RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 NPIPB6E9PJ23 425 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 HMGB3O15347 200 aaKnown RBP6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 CDKN1BP46527 198 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 TCTAP57738 103 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 TAS2R60P59551 318 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 ICAM4Q14773 271 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 LCN15Q6UWW0 184 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 OR1L4Q8NGR5 311 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 Q8TAT8 98 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 PHYHIPLQ96FC7 376 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 KRTAP1-5Q9BYS1 174 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 GSN-AS1Q9NRJ2 163 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
SHROOM3-203ENST00000469923 HIST1H1EP10412 219 aaKnown RBP6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 OR5I1Q13606 314 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 ZNF575Q86XF7 245 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 ZFAND2AQ8N6M9 145 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 C11orf72Q8NBR9 251 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 OR10J6PQ8NGY7 276 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 ST6GAL2Q96JF0 529 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 ATP5SQ99766 215 aa6.41□□□□□ -1.38
SHROOM3-203ENST00000469923 TRAV26-1A0A087WT03 109 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 CBY3A6NI87 242 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 LYRM9A8MSI8 78 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 MPDU1O75352 247 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 NBEAP1P0C6P0 100 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 P0DMU3 169 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 FAM231AP0DMU4 169 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 FAM231CP0DMU5 169 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TSPOP30536 169 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 RANP62826 216 aaKnown RBP6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TNP2Q05952 138 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 ESRGQ1W209 222 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 SAMD13Q5VXD3 122 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 S100A7AQ86SG5 101 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 LINC00612Q8N6U2 182 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 ZNRF2Q8NHG8 242 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TVP23CQ96ET8 276 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 SGK494Q96LW2 274 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 PFDN5Q99471 154 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TMPRSS5Q9H3S3 457 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TMEM14CQ9P0S9 112 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TIMM9Q9Y5J7 89 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.38
SHROOM3-203ENST00000469923 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 PET100P0DJ07 73 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 RAB2AP61019 212 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 LGALS9BQ3B8N2 356 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 FFAR4Q5NUL3 377 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 UBE2DNLQ8IWF7 75 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 SCGB1C1Q8TD33 95 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 SLC50A1Q9BRV3 221 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 PAXXQ9BUH6 204 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 OR51M1Q9H341 326 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 MDFICQ9P1T7 246 aa6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 TIMM8BQ9Y5J9 83 aaPredicted RBP6.39□□□□□ -1.39
SHROOM3-203ENST00000469923 KLLNB2CW77 178 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 C17orf112F2Z3M2 114 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 H7BYZ3 331 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 IFNA5P01569 189 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 GIPP09681 153 aaPredicted RBP6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 CXCL2P19875 107 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 MUC21Q5SSG8 566 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 MRPL16Q9NX20 251 aaKnown RBP6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 RNF24Q9Y225 148 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 FUT9Q9Y231 359 aa6.38□□□□□ -1.39
SHROOM3-203ENST00000469923 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 A0A096LPF7 62 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 C7orf71A4D174 169 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 G3V3Q6 166 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 SMLR1H3BR10 107 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 GNRH2O43555 120 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 ATP5G1P05496 136 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 LEPP41159 167 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 ATP5G3P48201 142 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 GNG5P63218 68 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 GUK1Q16774 197 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 C9orf47Q6ZRZ4 202 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 TMEM263Q8WUH6 116 aaKnown RBP6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 C16orf74Q96GX8 76 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 HYLS1Q96M11 299 aa6.37□□□□□ -1.39
SHROOM3-203ENST00000469923 TRAV8-1A0A0A6YYK1 113 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 RNF212Q495C1 297 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 ZFP69Q49AA0 526 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 TMEM256Q8N2U0 113 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 HSD17B11Q8NBQ5 300 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 FAM210BQ96KR6 192 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 LINC00477Q96M19 166 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 AQP10Q96PS8 301 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 Q9H3A6 140 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 ZNF492Q9P255 531 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 RPH3ALQ9UNE2 315 aa6.36□□□□□ -1.39
SHROOM3-203ENST00000469923 FXYD6-FXYD2A0A087WZ82 144 aa6.35□□□□□ -1.39
SHROOM3-203ENST00000469923 TRGV1A0A0A0MS02 117 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms