RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 TSTD3H0UI37 97 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 H3BMG7 143 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 SULT1C4O75897 302 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 IGHV3-33P01772 117 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 CD14P08571 375 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 SRP9P49458 86 aaKnown RBP0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 MAXP61244 160 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 TMEM128Q5BJH2 165 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 HRCT1Q6UXD1 115 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 C3orf62Q6ZUJ4 267 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 ARL17AQ8IVW1 177 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 C5orf17Q8NAS9 161 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 TMEM35BQ8NCS4 154 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 TET1Q8NFU7 2136 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 OR9Q1Q8NGQ5 310 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 THEM6Q8WUY1 208 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 SKA2Q8WVK7 121 aaPredicted RBP0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 CLEC2BQ92478 149 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 DIRC1Q969H9 104 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 MED31Q9Y3C7 131 aa0.78□□□□□ -2.28
SOX2-OT-204ENST00000469278 TRBV27A0A0K0K1C4 114 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 ARL5CA6NH57 179 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 SAA1P0DJI8 122 aaPredicted RBP0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 FXYD4P59646 89 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 GLIPR1L1Q6UWM5 242 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 SBSPONQ8IVN8 264 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 LINC00269Q8N2A0 174 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 CIB3Q96Q77 187 aaPredicted RBP0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 TAF9BQ9HBM6 251 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 SMPXQ9UHP9 88 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 COL1A1P02452 1464 aaPredicted RBP0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 PBRM1Q86U86 1689 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 ANKRD31Q8N7Z5 1873 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 TANC2Q9HCD6 1990 aa0.77□□□□□ -2.29
SOX2-OT-204ENST00000469278 CITO14578 2027 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 PTPRDP23468 1912 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 FRMPD1Q5SYB0 1578 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 ERBINQ96RT1 1412 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 TRBV30A0A0K0K1B3 111 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 NUPR2A6NF83 97 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 ZNF727A8MUV8 499 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 TOMM20LQ6UXN7 152 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 ZCCHC23Q6ZST2 131 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 Q86TA4 180 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 TMEM229BQ8NBD8 167 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 CCL4L1Q8NHW4 92 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 FKBP11Q9NYL4 201 aa0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
SOX2-OT-204ENST00000469278 ZCCHC11Q5TAX3 1644 aaKnown RBP0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 DLC1Q96QB1 1528 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 H0YJX3 145 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 CRYGSP22914 178 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 POLR2HP52434 150 aaKnown RBP0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 Q6ZQY7 126 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 LIMD2Q9BT23 127 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 DDA1Q9BW61 102 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 MRPL40Q9NQ50 206 aaKnown RBP0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 NINQ8N4C6 2090 aa0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 PHRF1Q9P1Y6 1649 aaKnown RBP0.75□□□□□ -2.29
SOX2-OT-204ENST00000469278 A0A0J9YY99 117 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 GNG14A0A1W2PPG7 69 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 M0QZK8 103 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 RPL7P18124 248 aaKnown RBP0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 ETV6P41212 452 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 DNAJB13P59910 316 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 RPL37AP61513 92 aaKnown RBP0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 SNRPD3P62318 126 aaKnown RBP0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 BRK1Q8WUW1 75 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 CCDC115Q96NT0 180 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 HSPB11Q9Y547 144 aa0.74□□□□□ -2.29
SOX2-OT-204ENST00000469278 A2MP01023 1474 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 BCL9O00512 1426 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 TRBV7-6A0A0J9YX20 115 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 LOC107984640A0A0U1RRK4 108 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 A0A1W2PPB8 328 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 A0A1W2PRS3 328 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 KIR3DP1A8MWS1 328 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 EDF1O60869 148 aaKnown RBP0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 GTF2A1P52655 376 aaPredicted RBP0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 FOXA3P55318 350 aaPredicted RBP0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 FXYD6P3P58550 94 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 BLCAPP62952 87 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 TCTEX1D1Q8N7M0 179 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 MORN4Q8NDC4 146 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 OR51A4Q8NGJ6 313 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 NABP2Q9BQ15 211 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 SMIM7Q9BQ49 75 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 CBLN4Q9NTU7 201 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 MPC1Q9Y5U8 109 aa0.73□□□□□ -2.29
SOX2-OT-204ENST00000469278 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 MUC4Q99102 2169 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 SLC25A4P12235 298 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 PDE6GP18545 87 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 RPS3P23396 243 aaKnown RBP eCLIP0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 KDELR1P24390 212 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 CKS2P33552 79 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 PSPHP78330 225 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 SPINK9Q5DT21 86 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms