RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LRRC75A-AS1Q8N1F1 130 aa7.97□□□□□ -1.13
NUP50-214ENST00000469163 TMEM147Q9BVK8 224 aa7.97□□□□□ -1.13
NUP50-214ENST00000469163 RNF7Q9UBF6 113 aa7.97□□□□□ -1.13
NUP50-214ENST00000469163 COL8A2P25067 703 aa7.96□□□□□ -1.13
NUP50-214ENST00000469163 HERVK_113P63121 156 aa7.96□□□□□ -1.13
NUP50-214ENST00000469163 Q6ZRM9 215 aa7.96□□□□□ -1.13
NUP50-214ENST00000469163 CARD19Q96LW7 228 aa7.96□□□□□ -1.13
NUP50-214ENST00000469163 TMEM133Q9H2Q1 129 aa7.96□□□□□ -1.13
NUP50-214ENST00000469163 YTHDF2Q9Y5A9 579 aaKnown RBP7.96□□□□□ -1.13
NUP50-214ENST00000469163 FLNAP21333 2647 aaKnown RBP7.96□□□□□ -1.13
NUP50-214ENST00000469163 A0A1W2PPI3 338 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 OR2J3O76001 311 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 IGHV3-48P01763 117 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 PRB4P10163 310 aaPredicted RBP7.96□□□□□ -1.14
NUP50-214ENST00000469163 FGF12P61328 243 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 GDF5OSQ5U4N7 250 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 LYPD2Q6UXB3 125 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 FAM168AQ92567 244 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 RPEQ96AT9 228 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 OSTCQ9NRP0 149 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 TCRBV4S1A1TA0A5B7 111 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 SPINT2O43291 252 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 CACNG7P62955 275 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 C4orf26Q17RF5 130 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 LINC01587Q99440 93 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
NUP50-214ENST00000469163 LINC01548A6NM66 108 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 FCGR3BO75015 233 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 PCSK4Q6UW60 755 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 TEN1Q86WV5 123 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 FAM90A1Q86YD7 464 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 DUX3Q96PT4 197 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 NPIPB6E9PJ23 425 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 LTAP01374 205 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
NUP50-214ENST00000469163 CFAP126Q5VTH2 177 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
NUP50-214ENST00000469163 DLX4Q92988 240 aaPredicted RBP7.95□□□□□ -1.14
NUP50-214ENST00000469163 TXNDC17Q9BRA2 123 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 C9JCJ5 164 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 NDUFB3O43676 98 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 ATP5LO75964 103 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 RPL39P5Q59GN2 51 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 H2BFWTQ7Z2G1 175 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 LINC00479Q96M42 142 aa7.95□□□□□ -1.14
NUP50-214ENST00000469163 SLC25A10Q9UBX3 287 aaPredicted RBP7.95□□□□□ -1.14
NUP50-214ENST00000469163 IGHV3-21A0A0B4J1V1 117 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 IGKV1D-13A0A0B4J2D9 117 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 IGKV1-13P0DP09 117 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 RPL35AP18077 110 aaKnown RBP7.94□□□□□ -1.14
NUP50-214ENST00000469163 ORM2P19652 201 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 AP5S1Q9NUS5 200 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 SMIM27A0A1W2PRY6 76 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 C17orf100A8MU93 164 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 RRN3P1Q2M238 152 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 CIARTQ8N365 385 aaPredicted RBP7.94□□□□□ -1.14
NUP50-214ENST00000469163 GATD1Q8NB37 220 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 NUP35Q8NFH5 326 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 RNASE6Q93091 150 aaKnown RBP7.94□□□□□ -1.14
NUP50-214ENST00000469163 COL5A1P20908 1838 aaPredicted RBP7.94□□□□□ -1.14
NUP50-214ENST00000469163 TINCRA0A1B0GVN0 87 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 TMEM30CPA0ZSE6 113 aa7.94□□□□□ -1.14
NUP50-214ENST00000469163 HIGD1CA8MV81 97 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 RRHO14718 337 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 CEND1Q8N111 149 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 CD177Q8N6Q3 437 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 FAM236AA0A1B0GUQ0 79 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 FAM236BA0A1B0GV22 79 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 NDUFA7O95182 113 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 ORM1P02763 201 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 UTF1Q5T230 341 aa7.93□□□□□ -1.14
NUP50-214ENST00000469163 Q71RC1 249 aaPredicted RBP7.93□□□□□ -1.14
NUP50-214ENST00000469163 A8MWV9 139 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 C12orf77C9JDV5 145 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 CCL1P22362 96 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 KIR2DS2P43631 304 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 ZNF415Q09FC8 603 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 ZC2HC1BQ5TFG8 222 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 FOXL2NBQ6ZUU3 175 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 MOB3BQ86TA1 216 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 ZNF747Q9BV97 191 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 V9GYY9 64 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 SORL1Q92673 2214 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 GGTLC3B5MD39 225 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 IL4P05112 153 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 PRSS3P2Q8NHM4 247 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 HIST1H4GQ99525 98 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 MDFICQ9P1T7 246 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 IQCF6A8MYZ5 107 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 EPDR1Q9UM22 224 aa7.92□□□□□ -1.14
NUP50-214ENST00000469163 FAM90A18PA6NE21 464 aa7.91□□□□□ -1.14
NUP50-214ENST00000469163 FAM90A16PA6NEW6 464 aa7.91□□□□□ -1.14
NUP50-214ENST00000469163 FAM90A8PA6NJQ4 464 aa7.91□□□□□ -1.14
NUP50-214ENST00000469163 FAM90A9PA6NNJ1 464 aa7.91□□□□□ -1.14
NUP50-214ENST00000469163 ACTL6BO94805 426 aa7.91□□□□□ -1.14
NUP50-214ENST00000469163 APOHP02749 345 aaPredicted RBP7.91□□□□□ -1.14
NUP50-214ENST00000469163 RPL30P62888 115 aaKnown RBP7.91□□□□□ -1.14
NUP50-214ENST00000469163 MRPL32Q9BYC8 188 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms