RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SNURFLB1AK76 121 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 OVOL1O14753 267 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 PHOX2AO14813 284 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 S100A8P05109 93 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 CDX1P47902 265 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-205ENST00000469129 NDUFA6P56556 154 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 SRSF2Q01130 221 aaKnown RBP7.12□□□□□ -1.27
SMC1A-205ENST00000469129 C10orf99Q6UWK7 81 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 RBPMS2Q6ZRY4 209 aaKnown RBP7.12□□□□□ -1.27
SMC1A-205ENST00000469129 RNF182Q8N6D2 247 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 ZNF738Q8NE65 137 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 OR2D3Q8NGH3 330 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 BORCS7Q96B45 105 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 PPP1R14DQ9NXH3 145 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 PEMTQ9UBM1 199 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 LENEPQ9Y5L5 61 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 IGHV4OR15-8A0A075B7B6 117 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 A0A087WW49 117 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 A0A1B0GW15 77 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 LINC01619G3V211 115 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 SOCS3O14543 225 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 CA1P00915 261 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-205ENST00000469129 CBLN1P23435 193 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 HLA-DMBP28068 263 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 HOXD3P31249 432 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-205ENST00000469129 AKR1D1P51857 326 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 ZNF138P52744 262 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 HILS1P60008 231 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 RPL11P62913 178 aaKnown RBP7.11□□□□□ -1.27
SMC1A-205ENST00000469129 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 KHDC1LQ5JSQ8 128 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
SMC1A-205ENST00000469129 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 Q71RC1 249 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-205ENST00000469129 TCF24Q7RTU0 167 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 OR10J6PQ8NGY7 276 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 C8orf49Q96NF6 230 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 ASCL2Q99929 193 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 VGLL1Q99990 258 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 MRPL18Q9H0U6 180 aaKnown RBP7.11□□□□□ -1.27
SMC1A-205ENST00000469129 C16orf95Q9H693 158 aa7.11□□□□□ -1.27
SMC1A-205ENST00000469129 TMEM213A2RRL7 107 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 TMEM189A5PLL7 270 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 ZNF705FA8MVS1 300 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-205ENST00000469129 SH2D1AO60880 128 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 LY6G6DO95868 133 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 HOXA5P20719 270 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 S100A2P29034 98 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 RIPPLY3P57055 190 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 RAB4BP61018 213 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 HBBP68871 147 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
SMC1A-205ENST00000469129 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 LINC00322Q6ZN03 302 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-205ENST00000469129 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 Q8TAT8 98 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 DPF1Q92782 380 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 C2CD3Q4AC94 2353 aa7.1□□□□□ -1.27
SMC1A-205ENST00000469129 ZFHX3Q15911 3703 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 ZANQ9Y493 2812 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 TRBV7-9A0A0J9YWB2 115 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 FABP5P3A8MUU1 101 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-205ENST00000469129 SYNJ2BPP57105 145 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 HIST1H1AQ02539 215 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-205ENST00000469129 KLHL30-AS1Q8NEE0 82 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 ESM1Q9NQ30 184 aa7.09□□□□□ -1.27
SMC1A-205ENST00000469129 A0A1B0GXF2 115 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 PRAC2D3DTV9 90 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 SPINK4O60575 86 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 NDUFA7O95182 113 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 APCSP02743 223 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 SNRPD3P62318 126 aaKnown RBP7.08□□□□□ -1.28
SMC1A-205ENST00000469129 PAFAH1B2P68402 229 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 RIGQ13278 110 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-205ENST00000469129 LINC01559Q495D7 138 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 AGPAT4-IT1Q9H0P7 198 aa7.08□□□□□ -1.28
SMC1A-205ENST00000469129 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
SMC1A-205ENST00000469129 TRAV2A0A0B4J234 112 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 A0A1B0GUT8 65 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 HAX1O00165 279 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 CRISP2P16562 243 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 ERCC8Q13216 396 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 OR10J3Q5JRS4 329 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 HIST3H2BBQ8N257 126 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 OR11H1Q8NG94 326 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 OR1N2Q8NGR9 330 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 GTSF1Q8WW33 167 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 GPR61Q9BZJ8 451 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 TLN2Q9Y4G6 2542 aa7.07□□□□□ -1.28
SMC1A-205ENST00000469129 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-205ENST00000469129 CTRLP40313 264 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 CRIP1P50238 77 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 SLURP1P55000 103 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms