RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 PRR9Q5T870 116 aa7.1□□□□□ -1.27
NEDD9-207ENST00000468612 DAZ4Q86SG3 579 aaKnown RBP7.1□□□□□ -1.27
NEDD9-207ENST00000468612 BPIFA4PQ86YQ2 179 aa7.1□□□□□ -1.27
NEDD9-207ENST00000468612 ARL6Q9H0F7 186 aa7.1□□□□□ -1.27
NEDD9-207ENST00000468612 DAZ3Q9NR90 486 aaKnown RBP7.1□□□□□ -1.27
NEDD9-207ENST00000468612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-207ENST00000468612 A0A0J9YXV3 536 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 A0A0U1RQV1 116 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 H3BQ15 152 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 PANO1I0J062 215 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 APOA1P02647 267 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 GPX1P07203 203 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 GATA1P15976 413 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-207ENST00000468612 SURF2Q15527 256 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-207ENST00000468612 ZFAND2AQ8N6M9 145 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 AGPAT4-IT1Q9H0P7 198 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 MTFP1Q9UDX5 166 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 GPR132Q9UNW8 380 aa7.09□□□□□ -1.27
NEDD9-207ENST00000468612 TRAV8-1A0A0A6YYK1 113 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 GGTLC3B5MD39 225 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 NMBP08949 121 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 RPP30P78346 268 aaKnown RBP7.08□□□□□ -1.28
NEDD9-207ENST00000468612 FFAR4Q5NUL3 377 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 LINC00305Q7Z4B0 112 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 TMEM229BQ8NBD8 167 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 OR4C5Q8NGB2 326 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 OR52I2Q8NH67 350 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 NRG4Q8WWG1 115 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 RMI2Q96E14 147 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 MRPL53Q96EL3 112 aaKnown RBP7.08□□□□□ -1.28
NEDD9-207ENST00000468612 DNAJC30Q96LL9 226 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 CNBD2Q96M20 576 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 SPXQ9BT56 116 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 GTSF1LQ9H1H1 148 aa7.08□□□□□ -1.28
NEDD9-207ENST00000468612 IGHV3-16A0A0C4DH30 117 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 SMCO3A2RU48 225 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 K7EPK0 472 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 RAB3DO95716 219 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 FAM122CQ6P4D5 195 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 OR51S1Q8NGJ8 323 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 CIB3Q96Q77 187 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-207ENST00000468612 COMMD3Q9UBI1 195 aa7.07□□□□□ -1.28
NEDD9-207ENST00000468612 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 FABP12A6NFH5 140 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 M0R3E3 92 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 TAS2R19P59542 299 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 GUK1Q16774 197 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 C14orf177Q52M58 125 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 SPANXN5Q5MJ07 72 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 PXDC1Q5TGL8 231 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 FAAP20Q6NZ36 180 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 SLC25A29Q8N8R3 303 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 KCNIP3Q9Y2W7 256 aa7.06□□□□□ -1.28
NEDD9-207ENST00000468612 WRBO00258 174 aa7.05□□□□□ -1.28
NEDD9-207ENST00000468612 ZNF253O75346 499 aa7.05□□□□□ -1.28
NEDD9-207ENST00000468612 MED6O75586 246 aa7.05□□□□□ -1.28
NEDD9-207ENST00000468612 SRRQ9GZT4 340 aa7.05□□□□□ -1.28
NEDD9-207ENST00000468612 H3BP45 60 aa7.04□□□□□ -1.28
NEDD9-207ENST00000468612 SYNGR2O43760 224 aa7.04□□□□□ -1.28
NEDD9-207ENST00000468612 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
NEDD9-207ENST00000468612 VWC2Q2TAL6 325 aa7.04□□□□□ -1.28
NEDD9-207ENST00000468612 MUC21Q5SSG8 566 aa7.04□□□□□ -1.28
NEDD9-207ENST00000468612 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
NEDD9-207ENST00000468612 STRAPQ9Y3F4 350 aaKnown RBP7.04□□□□□ -1.28
NEDD9-207ENST00000468612 HPGDSO60760 199 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 SLC25A6P12236 298 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 SRPXP78539 464 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 SLC38A11Q08AI6 406 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 RHOHQ15669 191 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 TMEM183BQ1AE95 376 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 WDR73Q6P4I2 378 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 ATRAIDQ6UW56 229 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 TMEM183AQ8IXX5 376 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
NEDD9-207ENST00000468612 TRBV6-4A0A1B0GX49 114 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 DUXBA0A1W2PPF3 345 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 DISC1C4P0D8 188 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 M0R2P5 195 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 COX7A2P2O60397 106 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 UBE2MP61081 183 aaKnown RBP7.02□□□□□ -1.29
NEDD9-207ENST00000468612 SDIM1Q6ZPB5 146 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 YIPF6Q96EC8 236 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 ZNF492Q9P255 531 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 PRELID1Q9Y255 219 aa7.02□□□□□ -1.29
NEDD9-207ENST00000468612 TRGV11A0A075B6L2 103 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 TRBV19A0A075B6N1 114 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-207ENST00000468612 FBLL1A6NHQ2 334 aaKnown RBP7.01□□□□□ -1.29
NEDD9-207ENST00000468612 ANKRD65E5RJM6 399 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 FNDC10F2Z333 226 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 NDUFB4O95168 129 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-207ENST00000468612 OR10J4P0C629 311 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 POLR2GP62487 172 aaKnown RBP eCLIP7.01□□□□□ -1.29
NEDD9-207ENST00000468612 BAK1Q16611 211 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 TMEM78Q5T7P6 136 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 ZNF546Q86UE3 836 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 ZC2HC1AQ96GY0 325 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms