RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ESM1Q9NQ30 184 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 NAT8BQ9UHF3 227 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 IGKV2-40A0A087WW87 121 aaPredicted RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 TMEM213A2RRL7 107 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 UBE2CO00762 179 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 IGKV2D-40P01614 121 aaPredicted RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 MT-ND6P03923 174 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 TRGC1P0CF51 173 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 CT45A10P0DMU9 189 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 CRIP1P50238 77 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 FOXA3P55318 350 aaPredicted RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 HILS1P60008 231 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 SNRPEP62304 92 aaKnown RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 ATP5L2Q7Z4Y8 100 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 ZNF418Q8TF45 676 aaPredicted RBP7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 C4orf3Q8WVX3 66 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 ZC2HC1AQ96GY0 325 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 C16orf92Q96LL3 132 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 NEU1Q99519 415 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 NDFIP1Q9BT67 221 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 GNB1LQ9BYB4 327 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 NRN1Q9NPD7 142 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 TRAPPC1Q9Y5R8 145 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 TLN2Q9Y4G6 2542 aa7.24□□□□□ -1.25
APOBEC1-202ENST00000467171 ITPR2Q14571 2701 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 FLNAP21333 2647 aaKnown RBP7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 IGHV4OR15-8A0A075B7B6 117 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 A0A087WW49 117 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 ZNF705FA8MVS1 300 aaPredicted RBP7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 OVOL1O14753 267 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 CA1P00915 261 aaPredicted RBP7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 SRD5A1P18405 259 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 HOXA5P20719 270 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 KLF5Q13887 457 aaPredicted RBP7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 C9orf47Q6ZRZ4 202 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 NUP35Q8NFH5 326 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 JMJD8Q96S16 334 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 VGLL1Q99990 258 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 LENEPQ9Y5L5 61 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 HECTD1Q9ULT8 2610 aa7.23□□□□□ -1.25
APOBEC1-202ENST00000467171 TEX15Q9BXT5 2789 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 NOTCH2Q04721 2471 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 HIGD1CA8MV81 97 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 HOXD3P31249 432 aaPredicted RBP7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 TCL1AP56279 114 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 FABP9Q0Z7S8 132 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 SMUG1Q53HV7 270 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 FAM162BQ5T6X4 162 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 Q6AWC8 147 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 TCF24Q7RTU0 167 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 RNF182Q8N6D2 247 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
APOBEC1-202ENST00000467171 ZNF469Q96JG9 3925 aaPredicted RBP7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 TRBV7-9A0A0J9YWB2 115 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 A0A1B0GXF2 115 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 XKRY2A2RUG3 117 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 LINC01619G3V211 115 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 NDUFA7O95182 113 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 LY6G6DO95868 133 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 HLA-DQA1P01909 254 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 ID1P41134 155 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 ZNF138P52744 262 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 RPS20P60866 119 aaKnown RBP7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 TMEM78Q5T7P6 136 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 TMEM136Q6ZRR5 245 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 GTSF1Q8WW33 167 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 C20orf173Q96LM9 149 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 LINC00477Q96M19 166 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 C8orf49Q96NF6 230 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 SONP18583 2426 aaKnown RBP7.21□□□□□ -1.26
APOBEC1-202ENST00000467171 C2orf70A6NJV1 201 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 SH2D1AO60880 128 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 CBLN1P23435 193 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 NDUFA6P56556 154 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 SYNJ2BPP57105 145 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 Q71RC1 249 aaPredicted RBP7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 OR1N2Q8NGR9 330 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 Q8TAT8 98 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 DCANP1Q8TF63 244 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 ASCL2Q99929 193 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 CELSR1Q9NYQ6 3014 aa7.2□□□□□ -1.26
APOBEC1-202ENST00000467171 ACANP16112 2415 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 MYO9AB2RTY4 2548 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 A0A1B0GW15 77 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 FABP5P3A8MUU1 101 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 SNURFLB1AK76 121 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms