RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PRELID3BQ9Y3B1 194 aa1.63□□□□□ -2.15
XRN1-206ENST00000467077 RNF213Q63HN8 5207 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 TRAV14DV4A0A0A6YYC5 116 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 IGKV1-6A0A0C4DH72 117 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 TMEM189A5PLL7 270 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 SMIM9A6NGZ8 99 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 IL4P05112 153 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 IGKV4-1P06312 121 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 HLA-GP17693 338 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 SRMP19623 302 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 SERPINB10P48595 397 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 MRPS15P82914 257 aaKnown RBP1.62□□□□□ -2.15
XRN1-206ENST00000467077 USF2Q15853 346 aaPredicted RBP1.62□□□□□ -2.15
XRN1-206ENST00000467077 CCDC58Q4VC31 144 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 TTC32Q5I0X7 151 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 DNLZQ5SXM8 178 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 KDM4DQ6B0I6 523 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 XAF1Q6GPH4 301 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 OR10K2Q6IF99 312 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 RPL22L1Q6P5R6 122 aaKnown RBP1.62□□□□□ -2.15
XRN1-206ENST00000467077 SSX7Q7RTT5 188 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 VSTM2AQ8TAG5 236 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 DEFB104AQ8WTQ1 72 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 DGCR14Q96DF8 476 aaKnown RBP1.62□□□□□ -2.15
XRN1-206ENST00000467077 CIB1Q99828 191 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 GINS4Q9BRT9 223 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 COMMD5Q9GZQ3 224 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 FAM107BQ9H098 131 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 HRASLSQ9HDD0 168 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 C12orf4Q9NQ89 552 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 ZNF586Q9NXT0 402 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 C21orf62Q9NYP8 219 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 LINC00588Q9Y4M8 146 aa1.62□□□□□ -2.15
XRN1-206ENST00000467077 TRAV6A0A075B6T7 132 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 TRBV6-7A0A0A0MS04 114 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 TRAV2A0A0B4J234 112 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 PNMA8CA0A1B0GUJ8 204 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 IGLC7A0M8Q6 106 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 A8MUU9 505 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 ZNF705FA8MVS1 300 aaPredicted RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 ANKRD65E5RJM6 399 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 F5H768 121 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 SIVA1O15304 175 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 FABP7O15540 132 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 GNG7O60262 68 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 HRASP01112 189 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 CTSGP08311 255 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 UBBP0CG47 229 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 ZNF705DP0CH99 300 aaPredicted RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 ZNF705BP0CI00 300 aaPredicted RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 OR13C7P0DN81 318 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 DEFB130BP0DP73 79 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 DEFB130AP0DP74 79 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 CD36P16671 472 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 MYL9P24844 172 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 GNRHRP30968 328 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 ETV1P50549 477 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 FXYD7P58549 80 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 TAS2R43P59537 309 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 DAD1P61803 113 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 FLOT2Q14254 428 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 KLK9Q2XQG4 91 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 Q499Y3 187 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 HSP90B2PQ58FF3 399 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 YIF1BQ5BJH7 314 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 PSMG4Q5JS54 123 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 TMPRSS11AQ6ZMR5 421 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 ZNF705AQ6ZN79 300 aaPredicted RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 GDPD1Q8N9F7 314 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 TMEM167AQ8TBQ9 72 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 GLYATL2Q8WU03 294 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 MAFIPQ8WZ33 124 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 SMIM19Q96E16 107 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 ARHGAP5-AS1Q96IT6 56 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 Q96MT0 163 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 CMSS1Q9BQ75 279 aaKnown RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 C7orf50Q9BRJ6 194 aaKnown RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 GINS3Q9BRX5 216 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 HINT2Q9BX68 163 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 PECRQ9BY49 303 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 NXF2Q9GZY0 626 aaKnown RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 GABARAPL1Q9H0R8 117 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 VSIRQ9H7M9 311 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 RHBDL2Q9NX52 303 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 BABAM2Q9NXR7 383 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 RABL2AQ9UBK7 228 aaPredicted RBP1.61□□□□□ -2.15
XRN1-206ENST00000467077 KLK9Q9UKQ9 250 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 ORC6Q9Y5N6 252 aa1.61□□□□□ -2.15
XRN1-206ENST00000467077 PUS1Q9Y606 427 aaKnown RBP eCLIP1.61□□□□□ -2.15
XRN1-206ENST00000467077 HMCN2Q8NDA2 5059 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 DNAH5Q8TE73 4624 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TRAV3A0A0B4J244 114 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TEX50A0A1B0GTY4 177 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TCRBV3S1A0A5B6 114 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 K7EIM0 57 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TAAR5O14804 337 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 MT-CO2P00403 227 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 STAG3L3P0CL85 134 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 LIMS3P0CW19 117 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 LIMS4P0CW20 117 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms