RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 A6NN06 94 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 M0R2Z0 102 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 UQCRQO14949 82 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 NPFFO15130 113 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 MIFP14174 115 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 SELENOWP63302 87 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 EMX2Q04743 252 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 KLRD1Q13241 179 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 CCSMST1Q4G0I0 132 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 TEN1Q86WV5 123 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 LINC00311Q8N616 119 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 OR5D16Q8NGK9 328 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 OR5H6Q8NGV6 325 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 POP5Q969H6 163 aaKnown RBP1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 AP1S3Q96PC3 154 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 TP53RKQ96S44 253 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 LINC00467Q9BRT7 94 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 TAS2R4Q9NYW5 299 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 DNAJC15Q9Y5T4 150 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 IBTKQ9P2D0 1353 aaPredicted RBP1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 UHRF1BP1LA0JNW5 1464 aa1.43□□□□□ -2.18
CDC42BPA-211ENST00000466538 FGD6Q6ZV73 1430 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 SMG6Q86US8 1419 aaKnown RBP1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 LAMB2P55268 1798 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 A0A087WSZ3 146 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 TRAV1-1A0A0B4J248 108 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 ZNF670-ZNF695F2Z2N8 137 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 J3QR89 54 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 TPST1O60507 370 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 PITX3O75364 302 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 IFNGP01579 166 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 IFNA4P05014 189 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 BAALC-AS2P0C853 105 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 MAXP61244 160 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 CDK5R1Q15078 307 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 HSD17B12Q53GQ0 312 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 C1orf134Q5TEV5 83 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 KRTAP26-1Q6PEX3 210 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 TMEM91Q6ZNR0 172 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 FAM216BQ8N7L0 139 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 CHCHD1Q96BP2 118 aaKnown RBP1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 MCEEQ96PE7 176 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 SLC50A1Q9BRV3 221 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 BANF2Q9H503 90 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 ALPK3Q96L96 1907 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 AKAP11Q9UKA4 1901 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 CUL7Q14999 1698 aa1.42□□□□□ -2.18
CDC42BPA-211ENST00000466538 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 IGKV3-7A0A075B6H7 116 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 TRAV14DV4A0A0A6YYC5 116 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 HBDP02042 147 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 MT-ND6P03923 174 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 CD3DP04234 171 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 ASAH2BP0C7U1 165 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 RNASE3P12724 160 aaKnown RBP1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 HLA-DRB4P13762 266 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 FABP4P15090 132 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 LSM3P62310 102 aaKnown RBP1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 SNRPD3P62318 126 aaKnown RBP1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 DEFB113Q30KQ7 82 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 GLIPR1L1Q6UWM5 242 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 CTAGE3PQ8IX95 158 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 OR10AC1Q8NH08 325 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 C10orf105Q8TEF2 133 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 ARL11Q969Q4 196 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 HLA-DRB4X5D2U9 266 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 SDK1Q7Z5N4 2213 aa1.41□□□□□ -2.18
CDC42BPA-211ENST00000466538 BCORL1Q5H9F3 1711 aa1.4□□□□□ -2.18
CDC42BPA-211ENST00000466538 MRC2Q9UBG0 1479 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 TRAV27A0A087WT01 109 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 SPAARA0A1B0GVQ0 90 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR2T8A6NH00 312 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 ATP6V1G2-DDX39BF2Z307 99 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 CD14P08571 375 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 SLC25A4P12235 298 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 SSR2P43308 183 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 NEDD8Q15843 81 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 FAM19A2Q8N3H0 131 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 HYLS1Q96M11 299 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 NABP2Q9BQ15 211 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 REG4Q9BYZ8 158 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 FKBP11Q9NYL4 201 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 COMMD3Q9UBI1 195 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 LSM2Q9Y333 95 aaKnown RBP1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 CHCHD2Q9Y6H1 151 aaPredicted RBP1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 HELZP42694 1942 aaKnown RBP1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 KIAA1549LQ6ZVL6 1849 aa1.4□□□□□ -2.19
CDC42BPA-211ENST00000466538 EML5Q05BV3 1969 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 MGAMO43451 1857 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 RP1L1Q8IWN7 2480 aaPredicted RBP1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 HCRTO43612 131 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 LYNX1P0DP58 116 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 MGST1P10620 155 aaKnown RBP1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 S100PP25815 95 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 BRS3P32247 399 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 COPZ1P61923 177 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 MRPS36P82909 103 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms