RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PSMB8P28062 276 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 SRIP30626 198 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 OR4B1Q8NGF8 309 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 PRR25Q96S07 402 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 SLC50A1Q9BRV3 221 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 SH2D1AO60880 128 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 SERF1AO75920 110 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
UBE4B-206ENST00000466379 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
UBE4B-206ENST00000466379 BAGE3Q86Y29 109 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 NPFFR1Q9GZQ6 430 aa10.36□□□□□ -0.75
UBE4B-206ENST00000466379 ITPR3Q14573 2671 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 RPLP1P05386 114 aaKnown RBP10.35□□□□□ -0.75
UBE4B-206ENST00000466379 HBBP68871 147 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
UBE4B-206ENST00000466379 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
UBE4B-206ENST00000466379 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
UBE4B-206ENST00000466379 IGKV3-7A0A075B6H7 116 aa10.34□□□□□ -0.75
UBE4B-206ENST00000466379 IQCJQ1A5X6 159 aa10.34□□□□□ -0.75
UBE4B-206ENST00000466379 SIGLECL1Q8N7X8 197 aa10.34□□□□□ -0.75
UBE4B-206ENST00000466379 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
UBE4B-206ENST00000466379 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
UBE4B-206ENST00000466379 ZNF580Q9UK33 172 aa10.34□□□□□ -0.75
UBE4B-206ENST00000466379 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 C20orf173Q96LM9 149 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 RCHY1Q96PM5 261 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-206ENST00000466379 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-206ENST00000466379 SSTP61278 116 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 Q0VG73 95 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 FAM162BQ5T6X4 162 aa10.33□□□□□ -0.76
UBE4B-206ENST00000466379 TMEM189A5PLL7 270 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
UBE4B-206ENST00000466379 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 AGPAT4-IT1Q9H0P7 198 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 CCDC168Q8NDH2 2452 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 DEFB1P60022 68 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
UBE4B-206ENST00000466379 HELZ2Q9BYK8 2649 aaKnown RBP10.32□□□□□ -0.76
UBE4B-206ENST00000466379 PDZD2O15018 2839 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 TLN2Q9Y4G6 2542 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 MUC21A0A0G2JKD1 596 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 IGHV7-4-1A0A0J9YVY3 117 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 MUC21A0A140T8X8 626 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 SRD5A1P18405 259 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 MUC21Q5SSG8 566 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 GSN-AS1Q9NRJ2 163 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 FBLL1A6NHQ2 334 aaKnown RBP10.31□□□□□ -0.76
UBE4B-206ENST00000466379 A8MWP6 167 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 FOXA3P55318 350 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-206ENST00000466379 ZNF738Q8NE65 137 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 NDFIP1Q9BT67 221 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 PRDM13Q9H4Q3 707 aa10.31□□□□□ -0.76
UBE4B-206ENST00000466379 OR10J3Q5JRS4 329 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 C18orf32Q8TCD1 76 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 DAZ1Q9NQZ3 744 aaKnown RBP10.3□□□□□ -0.76
UBE4B-206ENST00000466379 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 A0A1W2PS18 150 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 RBAKDNA6NC62 111 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 FAM181BA6NEQ2 426 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 HAX1O00165 279 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 CD33P20138 364 aa10.3□□□□□ -0.76
UBE4B-206ENST00000466379 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-206ENST00000466379 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-206ENST00000466379 SOCS3O14543 225 aa10.29□□□□□ -0.76
UBE4B-206ENST00000466379 PF4P02776 101 aa10.29□□□□□ -0.76
UBE4B-206ENST00000466379 ESDP10768 282 aa10.29□□□□□ -0.76
UBE4B-206ENST00000466379 FLNAP21333 2647 aaKnown RBP10.29□□□□□ -0.76
UBE4B-206ENST00000466379 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
UBE4B-206ENST00000466379 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
UBE4B-206ENST00000466379 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
UBE4B-206ENST00000466379 ZNF138P52744 262 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 HIST2H2BDQ6DRA6 164 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 Q6ZQT7 251 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 MRPL53Q96EL3 112 aaKnown RBP10.28□□□□□ -0.76
UBE4B-206ENST00000466379 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 TMEM89A2RUT3 159 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 ORM1P02763 201 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 PMCHP20382 165 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 BMI1P35226 326 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 NRN1Q9NPD7 142 aa10.28□□□□□ -0.76
UBE4B-206ENST00000466379 SONP18583 2426 aaKnown RBP10.28□□□□□ -0.76
UBE4B-206ENST00000466379 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.76
UBE4B-206ENST00000466379 A0A087WW49 117 aa10.27□□□□□ -0.76
UBE4B-206ENST00000466379 RIGQ13278 110 aa10.27□□□□□ -0.76
UBE4B-206ENST00000466379 FOXE3Q13461 319 aa10.27□□□□□ -0.76
UBE4B-206ENST00000466379 Q6ZWC4 215 aa10.27□□□□□ -0.76
UBE4B-206ENST00000466379 KCNS1Q96KK3 526 aa10.27□□□□□ -0.76
UBE4B-206ENST00000466379 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms