RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 A0A0J9YWU9 116 aa9.92□□□□□ -0.82
LIMD1-203ENST00000465039 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
LIMD1-203ENST00000465039 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
LIMD1-203ENST00000465039 M0R2Z0 102 aa9.92□□□□□ -0.82
LIMD1-203ENST00000465039 MBD3L1Q8WWY6 194 aa9.92□□□□□ -0.82
LIMD1-203ENST00000465039 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
LIMD1-203ENST00000465039 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 A0A1B0GVG6 124 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 KLLNB2CW77 178 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 H7BYZ3 331 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 K7EQM0 130 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 HMGB3O15347 200 aaKnown RBP9.91□□□□□ -0.82
LIMD1-203ENST00000465039 HBE1P02100 147 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 CT45A10P0DMU9 189 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 FHITP49789 147 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 ZNF138P52744 262 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 SSX7Q7RTT5 188 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 ZNF492Q9P255 531 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
LIMD1-203ENST00000465039 TRAV1-1A0A0B4J248 108 aa9.9□□□□□ -0.82
LIMD1-203ENST00000465039 PGPA6NDG6 321 aa9.9□□□□□ -0.82
LIMD1-203ENST00000465039 PPT1P50897 306 aa9.9□□□□□ -0.82
LIMD1-203ENST00000465039 TAS2R60P59551 318 aa9.9□□□□□ -0.82
LIMD1-203ENST00000465039 IGKV2-40A0A087WW87 121 aaPredicted RBP9.89□□□□□ -0.83
LIMD1-203ENST00000465039 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 IGKV2D-40P01614 121 aaPredicted RBP9.89□□□□□ -0.83
LIMD1-203ENST00000465039 FXYD7P58549 80 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 RRN3P1Q2M238 152 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 GFI1BQ5VTD9 330 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 FAM213BQ8TBF2 198 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 LINC00467Q9BRT7 94 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 ATG101Q9BSB4 218 aa9.89□□□□□ -0.83
LIMD1-203ENST00000465039 EIF3GO75821 320 aaKnown RBP eCLIP9.88□□□□□ -0.83
LIMD1-203ENST00000465039 TCRAP04437 139 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 RBMY1A1P0DJD3 496 aaKnown RBP9.88□□□□□ -0.83
LIMD1-203ENST00000465039 RBMY1CP0DJD4 496 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 SULT1A2P50226 295 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 CD300CQ08708 224 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 RBMY1FQ15415 496 aaKnown RBP9.88□□□□□ -0.83
LIMD1-203ENST00000465039 CYB561D1Q8N8Q1 229 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 HIST1H2BAQ96A08 127 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 VGLL1Q99990 258 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 PYGO2Q9BRQ0 406 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 NIPSNAP3BQ9BS92 247 aa9.88□□□□□ -0.83
LIMD1-203ENST00000465039 TRAV12-2A0A075B6T6 113 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 C7orf71A4D174 169 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 FAM74A7A6NL05 159 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 H2AFB1P0C5Y9 115 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 IQCF2Q8IXL9 164 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 TMEM75Q8N9X5 138 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 SFT2D1Q8WV19 159 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 C16orf74Q96GX8 76 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 EPDR1Q9UM22 224 aa9.87□□□□□ -0.83
LIMD1-203ENST00000465039 LOC102723971A0A1B0GUV8 181 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 NUPR2A6NF83 97 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 GPX1P07203 203 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 SUMO1P63165 101 aaKnown RBP9.86□□□□□ -0.83
LIMD1-203ENST00000465039 ERCC8Q13216 396 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 PMS2P11Q13670 270 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 CASC10Q5T4H9 136 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 TMEM263Q8WUH6 116 aaKnown RBP9.86□□□□□ -0.83
LIMD1-203ENST00000465039 TXNDC17Q9BRA2 123 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 NDFIP1Q9BT67 221 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
LIMD1-203ENST00000465039 IGHV3OR16-12A0A075B7B8 117 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 C11orf94C9JXX5 98 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 F6UZH7 168 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 SPART-AS1P0CW21 52 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 FGF8P55075 233 aaPredicted RBP9.85□□□□□ -0.83
LIMD1-203ENST00000465039 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 LINC01587Q99440 93 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 MANBALQ9NQG1 85 aa9.85□□□□□ -0.83
LIMD1-203ENST00000465039 YTHDF2Q9Y5A9 579 aaKnown RBP9.85□□□□□ -0.83
LIMD1-203ENST00000465039 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 LYRM9A8MSI8 78 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 ZNF324O75467 553 aaPredicted RBP9.84□□□□□ -0.83
LIMD1-203ENST00000465039 IFNA7P01567 189 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 TAGLN2P37802 199 aaKnown RBP9.84□□□□□ -0.83
LIMD1-203ENST00000465039 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 Q6AWC8 147 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 CCDC28AQ8IWP9 274 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 Q8TAT8 98 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 RNASE8Q8TDE3 154 aaKnown RBP9.84□□□□□ -0.83
LIMD1-203ENST00000465039 TMPRSS5Q9H3S3 457 aa9.84□□□□□ -0.83
LIMD1-203ENST00000465039 TRAV12-3A0A0B4J271 114 aa9.83□□□□□ -0.84
LIMD1-203ENST00000465039 TRBV6-1A0A0K0K1D8 114 aa9.83□□□□□ -0.84
LIMD1-203ENST00000465039 PEX7O00628 323 aa9.83□□□□□ -0.84
LIMD1-203ENST00000465039 TCTAP57738 103 aa9.83□□□□□ -0.84
LIMD1-203ENST00000465039 ANXA2RQ3ZCQ2 193 aa9.83□□□□□ -0.84
LIMD1-203ENST00000465039 DKK2Q9UBU2 259 aa9.83□□□□□ -0.84
LIMD1-203ENST00000465039 DEFB4AO15263 64 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 IGLV2-11P01706 119 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms