RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 RYR3Q15413 4870 aa2.88□□□□□ -1.95
UBR4-209ENST00000465036 KMT2CQ8NEZ4 4911 aaKnown RBP2.87□□□□□ -1.95
UBR4-209ENST00000465036 TRAV41A0A0B4J266 112 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 KRTAP4-16G5E9R7 235 aaPredicted RBP2.87□□□□□ -1.95
UBR4-209ENST00000465036 UPK2O00526 184 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 SERF1AO75920 110 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 GABARAPO95166 117 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 CRYZL1O95825 349 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 HLA-DQB1P01920 261 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 APELAP0DMC3 54 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 ELK1P19419 428 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 PSMB8P28062 276 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 TAS2R20P59543 309 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 FXYD4P59646 89 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 EIF4EBP1Q13541 118 aaPredicted RBP2.87□□□□□ -1.95
UBR4-209ENST00000465036 PLGLAQ15195 96 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 TIMM50Q3ZCQ8 353 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 C2orf83Q53S99 150 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 UBE2NLQ5JXB2 153 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 C10orf55Q5SWW7 151 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 FAM162BQ5T6X4 162 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
UBR4-209ENST00000465036 TRIQKQ629K1 86 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 SLC51BQ86UW2 128 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 ZNF695Q8IW36 515 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 WFDC9Q8NEX5 89 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 GRPEL2Q8TAA5 225 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 MYOZ3Q8TDC0 251 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 MARC2Q969Z3 335 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 GINS4Q9BRT9 223 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 TMEM243Q9BU79 118 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 DCSTAMPQ9H295 470 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 TAS2R8Q9NYW2 309 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 METTL1Q9UBP6 276 aaKnown RBP2.87□□□□□ -1.95
UBR4-209ENST00000465036 ANAPC10Q9UM13 185 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 RBM7Q9Y580 266 aaKnown RBP2.87□□□□□ -1.95
UBR4-209ENST00000465036 NUBP2Q9Y5Y2 271 aa2.87□□□□□ -1.95
UBR4-209ENST00000465036 PLECQ15149 4684 aaKnown RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 A0A1B0GW64 132 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 DISC1C4P0D8 188 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 C8orf87E5RJ46 101 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 E7EUB6 86 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 H3BP45 60 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 I3L521 148 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 IGHV3-11P01762 117 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 APOA2P02652 100 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 PMP2P02689 132 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 LINC00614P0C842 121 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 SAA1P0DJI8 122 aaPredicted RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 PRSS3P35030 304 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 RAB25P57735 213 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 SPCS3P61009 180 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 S100A12P80511 92 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 IFITM3Q01628 133 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 FXYD3Q14802 87 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 ORMDL2Q53FV1 153 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 TMEM69Q5SWH9 247 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 ZNF660Q6AZW8 331 aaPredicted RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 UNQ5815/PRO19632Q6UWF5 114 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 ZNF818PQ6ZRF7 136 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 PDPNQ86YL7 162 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 SNX29P2Q8IUI4 249 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 CLVS1Q8IUQ0 354 aaPredicted RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 ZNF645Q8N7E2 425 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 OR11H1Q8NG94 326 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 OR1P1Q8NH06 330 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 PHYHIPLQ96FC7 376 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 S100A16Q96FQ6 103 aaKnown RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 RNF5Q99942 180 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 FXYD6Q9H0Q3 95 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 MIXL1Q9H2W2 232 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 ZNF430Q9H8G1 570 aaPredicted RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 BATF3Q9NR55 127 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 C14orf166Q9Y224 244 aaKnown RBP2.86□□□□□ -1.95
UBR4-209ENST00000465036 DNAH1Q9P2D7 4330 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 HYDINQ4G0P3 5121 aa2.86□□□□□ -1.95
UBR4-209ENST00000465036 TNCP24821 2201 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 TRAV3A0A0B4J244 114 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 A0A1B0GV72 72 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 WI2-2373I1.2A0A1W2PRP0 233 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 PGPA6NDG6 321 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 FAM25AB3EWG3 89 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 FAM25CB3EWG5 89 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 FAM25GB3EWG6 89 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 K7EIL1 84 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 PPYP01298 95 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 PRH1P02810 166 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 CXCL3P19876 107 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 RAB4BP61018 213 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 RPL23P62829 140 aaKnown RBP2.85□□□□□ -1.95
UBR4-209ENST00000465036 CDK10Q15131 360 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 RTL8BQ17RB0 113 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 TMEM97Q5BJF2 176 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 OR51H1Q8NH63 302 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 Q8WTZ3 238 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 C4orf3Q8WVX3 66 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 GTSF1Q8WW33 167 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms