RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TIMM23O14925 209 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 SIVA1O15304 175 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 ORM1P02763 201 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 FCER1GP30273 86 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 RNF185Q96GF1 192 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 PPIAL4CA0A0B4J2A2 164 aa9.82□□□□□ -0.84
CLCNKA-204ENST00000464764 PPIAL4GP0DN37 164 aa9.82□□□□□ -0.84
CLCNKA-204ENST00000464764 ODF1Q14990 250 aa9.82□□□□□ -0.84
CLCNKA-204ENST00000464764 ERCC8Q13216 396 aa9.82□□□□□ -0.84
CLCNKA-204ENST00000464764 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
CLCNKA-204ENST00000464764 AGRNO00468 2067 aa9.82□□□□□ -0.84
CLCNKA-204ENST00000464764 SPTAN1Q13813 2472 aaKnown RBP9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 FTH1P19P0C7X4 201 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 WFDC12Q8WWY7 111 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 FOXC2Q99958 501 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 CHAC1Q9BUX1 264 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 WFDC2Q14508 124 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 OR5A1Q8NGJ0 315 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 RALYQ9UKM9 306 aaKnown RBP9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 TRBV25-1A0A075B6N4 114 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 E7EQL1 145 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 IGHG4P01861 327 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 MAPKAPK5-AS1Q8N8E1 139 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 TMEM160Q9NX00 188 aa9.81□□□□□ -0.84
CLCNKA-204ENST00000464764 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 KAAG1Q9UBP8 84 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 PRAC2D3DTV9 90 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 TNFRSF6BO95407 300 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 SAMD13Q5VXD3 122 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 AMTNQ6UX39 209 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 TMEM158Q8WZ71 300 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 SMAD5-AS1Q9Y6J3 95 aa9.8□□□□□ -0.84
CLCNKA-204ENST00000464764 TRAV40A0A0B4J280 105 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 TMEM8BA6NDV4 472 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 DEFB123Q8N688 67 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 PHLDA1Q8WV24 401 aaPredicted RBP9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 ONECUT1Q9UBC0 465 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 CEACAM4O75871 244 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 LY6HO94772 140 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 IGLC6P0CF74 106 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 AZU1P20160 251 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 Q6ZQT7 251 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 HES1Q14469 280 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 FAM57AQ8TBR7 257 aa9.79□□□□□ -0.84
CLCNKA-204ENST00000464764 IGHV3OR16-13A0A075B7E8 117 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 IGHV3-74A0A0B4J1X5 117 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 IGHV3-66A0A0C4DH42 116 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 IGKCP01834 107 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 KLRD1Q13241 179 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 Q6ZS92 163 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 MAP1AP78559 2803 aaPredicted RBP9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 H3BMG7 143 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 SPOCK3Q9BQ16 436 aa9.78□□□□□ -0.84
CLCNKA-204ENST00000464764 ZFHX2Q9C0A1 2572 aaPredicted RBP9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 TRGV3P03979 118 aa9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 NDPQ00604 133 aa9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 DYNAPQ8N1N2 210 aa9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 ZMAT4Q9H898 229 aa9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 TSSC4Q9Y5U2 329 aaPredicted RBP9.77□□□□□ -0.84
CLCNKA-204ENST00000464764 SHISA9B4DS77 424 aa9.77□□□□□ -0.85
CLCNKA-204ENST00000464764 DTX2Q86UW9 622 aa9.77□□□□□ -0.85
CLCNKA-204ENST00000464764 LY6LH3BQJ8 138 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 PDE6HQ13956 83 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 TLN1Q9Y490 2541 aaKnown RBP9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 NBR2O15453 112 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 SPRY2O43597 315 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 ETDBQ3ZM63 59 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 CEND1Q8N111 149 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 ARPC1AQ92747 370 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 TNFRSF14Q92956 283 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 PSMG3-AS1Q96PY0 264 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 INSL3P51460 131 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 EFNA4P52798 201 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 MFAP4P55083 255 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
CLCNKA-204ENST00000464764 IGLL5B9A064 214 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 NDUFA3O95167 84 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 IL17RELQ6ZVW7 336 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 CFHR4Q92496 578 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 NCBP2LA6PVI3 153 aaKnown RBP9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 BMI1P35226 326 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 C21orf62Q9NYP8 219 aa9.75□□□□□ -0.85
CLCNKA-204ENST00000464764 CELSR1Q9NYQ6 3014 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 IGLV11-55A0A075B6I3 123 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 IGHV3-49A0A0A0MS15 119 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 DPM2O94777 84 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 ZNF292O60281 2723 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms