RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CHCHD1Q96BP2 118 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-216ENST00000464275 KLK15Q9H2R5 256 aa16.72■□□□□ 0.27
PDLIM2-216ENST00000464275 UQCR10Q9UDW1 63 aa16.72■□□□□ 0.27
PDLIM2-216ENST00000464275 DOPEY2Q9Y3R5 2298 aa16.72■□□□□ 0.27
PDLIM2-216ENST00000464275 POLQO75417 2590 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 NDUFA4O00483 81 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 SPATA45Q537H7 98 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 TCF24Q7RTU0 167 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 ZFHX3Q15911 3703 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 M0R2Z0 102 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 RPLP1P05386 114 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 NTF3P20783 257 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 GTSF1Q8WW33 167 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 SLC50A1Q9BRV3 221 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 VPREB3Q9UKI3 123 aa16.71■□□□□ 0.27
PDLIM2-216ENST00000464275 A0A1B0GW15 77 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 HAX1O00165 279 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 CHEK1O14757 476 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 ZNF207O43670 478 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 APOHP02749 345 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 OR2D3Q8NGH3 330 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 ZC2HC1AQ96GY0 325 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 PSMG3-AS1Q96PY0 264 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 CELSR1Q9NYQ6 3014 aa16.7■□□□□ 0.26
PDLIM2-216ENST00000464275 IGHV3-66A0A0C4DH42 116 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 FAM181BA6NEQ2 426 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 TRBV12-3P01733 135 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 FAM19A2Q8N3H0 131 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 OR4X2Q8NGF9 303 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 NDFIP1Q9BT67 221 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 IGHV3-11P01762 117 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 IGHG4P01861 327 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 BTF3P20290 206 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 Q6AWC8 147 aa16.69■□□□□ 0.26
PDLIM2-216ENST00000464275 RNASEKQ6P5S7 137 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 SSBP4Q9BWG4 385 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 IGHV3OR16-13A0A075B7E8 117 aa16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 IGHV3-74A0A0B4J1X5 117 aa16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 TMEM89A2RUT3 159 aa16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 Q71RC1 249 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 PGLYRP4Q96LB8 373 aa16.68■□□□□ 0.26
PDLIM2-216ENST00000464275 IGKV2-40A0A087WW87 121 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 IGHV3-49A0A0A0MS15 119 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 IGKV2D-40P01614 121 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 HLA-DMBP28068 263 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 TMEM95Q3KNT9 176 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 SAPCD1Q5SSQ6 148 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 IGFL4Q6B9Z1 124 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 LCN12Q6JVE5 192 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 GATD1Q8NB37 220 aa16.67■□□□□ 0.26
PDLIM2-216ENST00000464275 IGLC3P0DOY3 106 aa16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 PRB4P10163 310 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 OR5AL1P0C617 328 aa16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 CT45A10P0DMU9 189 aa16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 HIST2H2BCQ6DN03 193 aa16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 LCNL1Q6ZST4 164 aa16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 COX8CQ7Z4L0 72 aa16.66■□□□□ 0.26
PDLIM2-216ENST00000464275 LOC102724200A0A096LPH7 203 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 PSMB8P28062 276 aa16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 UNQ9165/PRO28630Q6UXU0 137 aa16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 GLMPQ8WWB7 406 aa16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 C8orf49Q96NF6 230 aa16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 ASCL2Q99929 193 aa16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 MAP1AP78559 2803 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-216ENST00000464275 RIGQ13278 110 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 NAV2Q8IVL1 2488 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 ABCA12Q86UK0 2595 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 A0A1B0GUT8 65 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 C2orf70A6NJV1 201 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 CRXO43186 299 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 MRPL53Q96EL3 112 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 PRR25Q96S07 402 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 NPFFR1Q9GZQ6 430 aa16.64■□□□□ 0.25
PDLIM2-216ENST00000464275 CSMD2Q7Z408 3487 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 TRAV9-2A0A087WT02 112 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 RBAKDNA6NC62 111 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 HOXA3O43365 443 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 CRIP1P50238 77 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 VGLL1Q99990 258 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 TMEM70Q9BUB7 260 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 CLEC5AQ9NY25 188 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 PEF1Q9UBV8 284 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 CENPEQ02224 2701 aa16.63■□□□□ 0.25
PDLIM2-216ENST00000464275 COL5A1-AS1Q5SY13 56 aa16.62■□□□□ 0.25
PDLIM2-216ENST00000464275 C8orf86Q6ZUL3 223 aa16.62■□□□□ 0.25
PDLIM2-216ENST00000464275 EBLN2Q6P2I7 272 aa16.62■□□□□ 0.25
PDLIM2-216ENST00000464275 TEX29Q8N6K0 151 aa16.62■□□□□ 0.25
PDLIM2-216ENST00000464275 WFDC11Q8NEX6 87 aa16.62■□□□□ 0.25
PDLIM2-216ENST00000464275 TRAV8-2A0A0B4J237 113 aa16.61■□□□□ 0.25
PDLIM2-216ENST00000464275 GAGE1Q13065 139 aa16.61■□□□□ 0.25
PDLIM2-216ENST00000464275 RNF182Q8N6D2 247 aa16.61■□□□□ 0.25
PDLIM2-216ENST00000464275 URB1-AS1Q96HZ7 61 aa16.61■□□□□ 0.25
PDLIM2-216ENST00000464275 HNRNPA3P51991 378 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-216ENST00000464275 ZNF702PQ9H963 129 aa16.6■□□□□ 0.25
PDLIM2-216ENST00000464275 MRPS16Q9Y3D3 137 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-216ENST00000464275 SMAD7O15105 426 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-216ENST00000464275 LINC00614P0C842 121 aa16.6■□□□□ 0.25
PDLIM2-216ENST00000464275 APCP25054 2843 aa16.59■□□□□ 0.25
PDLIM2-216ENST00000464275 Q6ZN92 141 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms