RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 H3BUX3 64 aa15.68■□□□□ 0.1
TUBGCP3-204ENST00000464139 TMEM70Q9BUB7 260 aa15.67■□□□□ 0.1
TUBGCP3-204ENST00000464139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.67■□□□□ 0.16e-7■■■■□ 26.5
TUBGCP3-204ENST00000464139 TRBV12-3P01733 135 aa15.67■□□□□ 0.1
TUBGCP3-204ENST00000464139 MSMBP08118 114 aa15.67■□□□□ 0.1
TUBGCP3-204ENST00000464139 BMI1P35226 326 aa15.67■□□□□ 0.1
TUBGCP3-204ENST00000464139 ZNF575Q86XF7 245 aa15.67■□□□□ 0.1
TUBGCP3-204ENST00000464139 TIMM8BQ9Y5J9 83 aaPredicted RBP15.67■□□□□ 0.1
TUBGCP3-204ENST00000464139 CENPEQ02224 2701 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 TRAV8-2A0A0B4J237 113 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 LEPROTL1O95214 131 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 ORM1P02763 201 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 ZNF493Q6ZR52 646 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 IL17RELQ6ZVW7 336 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 SLC50A1Q9BRV3 221 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 FAM223BA6NKX1 122 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 PRB1P04280 392 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 FAM223AQ8IWN6 122 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 AMN1Q8IY45 258 aa15.66■□□□□ 0.1
TUBGCP3-204ENST00000464139 ARL3P36405 182 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 CRIP2P52943 208 aaPredicted RBP15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 AVPP01185 164 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 IGLC3P0DOY3 106 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 BLCAPP62952 87 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 Q6ZS46 218 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 C8orf86Q6ZUL3 223 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 FER1L6-AS1Q8NA97 138 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 U3KQE9 123 aa15.65■□□□□ 0.1
TUBGCP3-204ENST00000464139 FAM208BQ5VWN6 2430 aa15.64■□□□□ 0.09
TUBGCP3-204ENST00000464139 D6R8Y8 96 aa15.64■□□□□ 0.09
TUBGCP3-204ENST00000464139 HIF1ANQ9NWT6 349 aa15.64■□□□□ 0.09
TUBGCP3-204ENST00000464139 FABP5P3A8MUU1 101 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 AGPAT4-IT1Q9H0P7 198 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 CSPG4Q6UVK1 2322 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 A6NDX4 124 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 IGHV3-11P01762 117 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 IGF1P05019 195 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 NUTF2P61970 127 aaKnown RBP15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 TWIST1Q15672 202 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 FAM104BQ5XKR9 115 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 UNQ9165/PRO28630Q6UXU0 137 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 LRRK2Q5S007 2527 aa15.63■□□□□ 0.09
TUBGCP3-204ENST00000464139 IGLC6P0CF74 106 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 RPS20P60866 119 aaKnown RBP15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 RBAKDNA6NC62 111 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 SYS1-DBNDD2H3BUS1 97 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 LCNL1Q6ZST4 164 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 PRSS3P2Q8NHM4 247 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 KLK15Q9H2R5 256 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 UQCR10Q9UDW1 63 aa15.62■□□□□ 0.09
TUBGCP3-204ENST00000464139 TRAV9-2A0A087WT02 112 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 LOC389332A0A1B0GUA5 103 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 IGHG2P01859 326 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 PPIFP30405 207 aaKnown RBP15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 BATFQ16520 125 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 FAM106AQ4KMX7 169 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 MCRIP2Q9BUT9 160 aaKnown RBP15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 AP5S1Q9NUS5 200 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 MSRB1Q9NZV6 116 aa15.61■□□□□ 0.09
TUBGCP3-204ENST00000464139 H0Y8G0 127 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 IFI27P40305 119 aaPredicted RBP15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 MRPL51Q4U2R6 128 aaKnown RBP15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 PSMG3-AS1Q96PY0 264 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 OR4C46A6NHA9 309 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 SMAD7O15105 426 aaKnown RBP15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 CRXO43186 299 aaPredicted RBP15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 IGLL1P15814 213 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 Q6ZN92 141 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 FA2HQ7L5A8 372 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 KLHDC1Q8N7A1 406 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 PRELID3AQ96N28 172 aa15.6■□□□□ 0.09
TUBGCP3-204ENST00000464139 SMKR1H3BMG3 65 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 OR5AL1P0C617 328 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 PF4V1P10720 104 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 C16orf92Q96LL3 132 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 ATP6V0BQ99437 205 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 B4DSR2 109 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 TMEM78Q5T7P6 136 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 GLMPQ8WWB7 406 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 BBC3Q96PG8 261 aaPredicted RBP15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 SPOCK3Q9BQ16 436 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 U3KQK5 164 aa15.59■□□□□ 0.09
TUBGCP3-204ENST00000464139 LOXL1Q08397 574 aaPredicted RBP15.58■□□□□ 0.09
TUBGCP3-204ENST00000464139 ORMDL3Q8N138 153 aa15.58■□□□□ 0.09
TUBGCP3-204ENST00000464139 C11orf21Q9P2W6 132 aa15.58■□□□□ 0.09
TUBGCP3-204ENST00000464139 POLQO75417 2590 aa15.58■□□□□ 0.09
TUBGCP3-204ENST00000464139 SRSF2Q01130 221 aaKnown RBP15.58■□□□□ 0.08
TUBGCP3-204ENST00000464139 SIGLEC8Q9NYZ4 499 aa15.58■□□□□ 0.08
TUBGCP3-204ENST00000464139 M0QZK8 103 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 LINC01559Q495D7 138 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 Q6ZQT7 251 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 MAP1LC3CQ9BXW4 147 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 USP9YO00507 2555 aaPredicted RBP15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 IGKV3D-20A0A0C4DH25 116 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 NCR2O95944 276 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 C20orf173Q96LM9 149 aa15.57■□□□□ 0.08
TUBGCP3-204ENST00000464139 HNRNPA3P51991 378 aaKnown RBP15.56■□□□□ 0.08
TUBGCP3-204ENST00000464139 DMRTA1Q5VZB9 504 aa15.56■□□□□ 0.08
TUBGCP3-204ENST00000464139 MRPL52Q86TS9 123 aaKnown RBP15.56■□□□□ 0.08
TUBGCP3-204ENST00000464139 HSPB8Q9UJY1 196 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms