RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF747Q9BV97 191 aa7.67□□□□□ -1.18
PTPRD-207ENST00000463477 C16orf95Q9H693 158 aa7.67□□□□□ -1.18
PTPRD-207ENST00000463477 A0A1B0GW15 77 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 CLPSL1A2RUU4 121 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 H3BTX0 84 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 AMTP48728 403 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 RAB9AP51151 201 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 Q56UQ5 140 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 Q6AWC8 147 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 LINC01006Q8NI28 216 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 RCHY1Q96PM5 261 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 C2orf88Q9BSF0 95 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 NRN1Q9NPD7 142 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 PSG8Q9UQ74 426 aa7.66□□□□□ -1.18
PTPRD-207ENST00000463477 A6NDX4 124 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 ZNF705FA8MVS1 300 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-207ENST00000463477 CTSGP08311 255 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 ZNF705DP0CH99 300 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-207ENST00000463477 ZNF705BP0CI00 300 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-207ENST00000463477 RAB4AP20338 218 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 LY6EQ16553 131 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 TOMM20LQ6UXN7 152 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 Q6ZSV7 163 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 TCF24Q7RTU0 167 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 NIT1Q86X76 327 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 SGK494Q96LW2 274 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 FBXL7Q9UJT9 491 aa7.65□□□□□ -1.18
PTPRD-207ENST00000463477 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 ZNF785A8K8V0 405 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 APOHP02749 345 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-207ENST00000463477 Q8N976 141 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 ZNF502Q8TBZ5 544 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 ZC2HC1AQ96GY0 325 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 C17orf77Q96MU5 243 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 NDFIP1Q9BT67 221 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 ZMAT5Q9UDW3 170 aaKnown RBP7.64□□□□□ -1.19
PTPRD-207ENST00000463477 RABAC1Q9UI14 185 aa7.64□□□□□ -1.19
PTPRD-207ENST00000463477 A0A087X0K7 114 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 CSN1S1P47710 185 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 CRIP2P52943 208 aaPredicted RBP7.63□□□□□ -1.19
PTPRD-207ENST00000463477 SHISA2Q6UWI4 295 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 OR2D3Q8NGH3 330 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 RNF114Q9Y508 228 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 A0A1B0GUT8 65 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 SH2D7A6NKC9 451 aaPredicted RBP7.63□□□□□ -1.19
PTPRD-207ENST00000463477 CAMPP49913 170 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 PROK1P58294 105 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 SAPCD1Q5SSQ6 148 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 CHCHD1Q96BP2 118 aaKnown RBP7.63□□□□□ -1.19
PTPRD-207ENST00000463477 PGLYRP4Q96LB8 373 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 VAMP8Q9BV40 100 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 NPFFR1Q9GZQ6 430 aa7.63□□□□□ -1.19
PTPRD-207ENST00000463477 LOC102724200A0A096LPH7 203 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-207ENST00000463477 OR2T8A6NH00 312 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 HSBP1O75506 76 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 CT45A10P0DMU9 189 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 PMCHP20382 165 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 RIGQ13278 110 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 UNQ5815/PRO19632Q6UWF5 114 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 Q8N2B8 174 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 BORCS7Q96B45 105 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 ZFAND3Q9H8U3 227 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
PTPRD-207ENST00000463477 TRBV7-1A0A0A6YYK4 115 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 ATP6V0E1O15342 81 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 BRI3O95415 125 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 KRTDAPP60985 99 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 PMCHL1Q16048 86 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 TMEM219Q86XT9 240 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 C5orf56Q8N8D9 126 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 WFDC12Q8WWY7 111 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 MIEN1Q9BRT3 115 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 SSBP4Q9BWG4 385 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-207ENST00000463477 S4R3C0 116 aa7.61□□□□□ -1.19
PTPRD-207ENST00000463477 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.6□□□□□ -1.19
PTPRD-207ENST00000463477 M0R3E3 92 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 CHEK1O14757 476 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 CD33P20138 364 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 CTRLP40313 264 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 CRIP1P50238 77 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 RPS20P60866 119 aaKnown RBP7.6□□□□□ -1.19
PTPRD-207ENST00000463477 RHOGP84095 191 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 C15orf32Q32M92 178 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 C19orf54Q5BKX5 351 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 ZNF493Q6ZR52 646 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 CITED1Q99966 193 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 MOB4Q9Y3A3 225 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 SMAD5-AS1Q9Y6J3 95 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 C20orf202A1L168 122 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 RBAKDNA6NC62 111 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 M0QZK8 103 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 M0R143 59 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 BUB3O43684 328 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 KRTAP10-3P60369 221 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 BLCAPP62952 87 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 EEF1AKMT3Q96AZ1 226 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms