RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 FABP4P15090 132 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 ADCYAP1P18509 176 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 S100A4P26447 101 aaKnown RBP1.9□□□□□ -2.11
USH2A-203ENST00000463147 FAUP35544 74 aaKnown RBP1.9□□□□□ -2.11
USH2A-203ENST00000463147 ATP5G3P48201 142 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 LCN6P62502 163 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 ZNF345Q14585 488 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 LYRM7Q5U5X0 104 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 FAM27BQ5VT28 67 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 Q6Q795 121 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 LYZL1Q6UWQ5 148 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 TCF24Q7RTU0 167 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 HIST3H2BBQ8N257 126 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 KCNRGQ8N5I3 272 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 ZNF439Q8NDP4 499 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 OR4E2Q8NGC2 313 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 SLC39A9Q9NUM3 307 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 PRNDQ9UKY0 176 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 TIMM9Q9Y5J7 89 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 ARAP2Q8WZ64 1704 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 PEAK1Q9H792 1746 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 ZFC3H1O60293 1989 aaKnown RBP1.9□□□□□ -2.11
USH2A-203ENST00000463147 RBBP6Q7Z6E9 1792 aaKnown RBP1.9□□□□□ -2.11
USH2A-203ENST00000463147 SCN7AQ01118 1682 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 TMSB15BA0A087X1C1 80 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 TRAV38-1A0A0B4J264 116 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 TRDV1A0A1B0GX56 115 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 C7orf77A4D0Y5 90 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 E7EQ34 232 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 FNDC10F2Z333 226 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 F6UZH7 168 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 MFSD11O43934 449 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 UBL3O95164 117 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 CLPSP04118 112 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 MSMBP08118 114 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 NBEAP1P0C6P0 100 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 SFTA3P0C7M3 94 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 SCGB1A1P11684 91 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 SLC25A4P12235 298 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 GLRXP35754 106 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 AKR1C3P42330 323 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 HIST1H4AP62805 103 aaKnown RBP1.89□□□□□ -2.11
USH2A-203ENST00000463147 ZNF90Q03938 601 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 IQCJQ1A5X6 159 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 KHDC3LQ587J8 217 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 OR2T2Q6IF00 324 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 FAM24BQ8N5W8 94 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 PLPP5Q8NEB5 264 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 TP53RKQ96S44 253 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 OR2J1Q9GZK6 312 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 ATG5Q9H1Y0 275 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 TPT1P8Q9HAU6 139 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 LYRM2Q9NU23 88 aaPredicted RBP1.89□□□□□ -2.11
USH2A-203ENST00000463147 LSM2Q9Y333 95 aaKnown RBP1.89□□□□□ -2.11
USH2A-203ENST00000463147 PHIPQ8WWQ0 1821 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 DIP2BQ9P265 1576 aa1.89□□□□□ -2.11
USH2A-203ENST00000463147 DDX60LQ5H9U9 1706 aaKnown RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 NHSL1Q5SYE7 1610 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 STRCP1A6NGW2 1772 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 RGPD2P0DJD1 1756 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 TRAV30A0A087WSZ9 112 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 IGHV1-18A0A0C4DH31 117 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 ZNF705FA8MVS1 300 aaPredicted RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 H7C2G1 150 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 APODP05090 189 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 IGKV4-1P06312 121 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 OR10J4P0C629 311 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 LINC00032P0C843 101 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 ZNF705BP0CI00 300 aaPredicted RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 RPS4Y1P22090 263 aaKnown RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 S100GP29377 79 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 PEBP1P30086 187 aaKnown RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 BRS3P32247 399 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 SNCAP37840 140 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 HINT1P49773 126 aaPredicted RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 CAV3P56539 151 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 PIGPP57054 158 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 SNRPGP62308 76 aaKnown RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 RPS25P62851 125 aaKnown RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 SMIM21Q3B7S5 101 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 SAMD13Q5VXD3 122 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 HEPN1Q6WQI6 88 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 TMEM91Q6ZNR0 172 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 LCA10Q71F78 164 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 SLC30A7Q8NEW0 376 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 OR4S1Q8NGB4 309 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 SPACA4Q8TDM5 124 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 THEM6Q8WUY1 208 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 TEX37Q96LM6 180 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 HIST1H2BLQ99880 126 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 TMEM70Q9BUB7 260 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 RERGLQ9H628 205 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 CBLN4Q9NTU7 201 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 ACER3Q9NUN7 267 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 ABRACLQ9P1F3 81 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 CACFD1Q9UGQ2 172 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 TNFSF18Q9UNG2 199 aa1.88□□□□□ -2.11
USH2A-203ENST00000463147 AMMECR1Q9Y4X0 333 aaPredicted RBP1.88□□□□□ -2.11
USH2A-203ENST00000463147 DNAJC15Q9Y5T4 150 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms