RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 RTTNQ86VV8 2226 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 TRBV25-1A0A075B6N4 114 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 A0A087WX48 190 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 TRBV7-1A0A0A6YYK4 115 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 IGHV7-81A0A0B4J1V7 117 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 TRAV12-1A0A0B4J245 112 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 TMEM8BA6NDV4 472 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 OR11H12B2RN74 326 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 TMEM238C9JI98 176 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 PRAC2D3DTV9 90 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 LINC01619G3V211 115 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-204ENST00000462604 H7C1H1 209 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 K7ERJ3 54 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 CTSGP08311 255 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 SCGB1A1P11684 91 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 GATA1P15976 413 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-204ENST00000462604 SLC25A16P16260 332 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 PPIFP30405 207 aaKnown RBP2.72□□□□□ -1.97
COL8A1-204ENST00000462604 EBI3Q14213 229 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 ECSCRQ19T08 205 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 C15orf32Q32M92 178 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 FBXL19-AS1Q494R0 122 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 ORMDL2Q53FV1 153 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 PRR30Q53SZ7 412 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-204ENST00000462604 ZC2HC1BQ5TFG8 222 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 LYRM7Q5U5X0 104 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 SPANXN1Q5VSR9 72 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 SAMD13Q5VXD3 122 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 IGFL4Q6B9Z1 124 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 C9orf139Q6ZV77 190 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 OR11H1Q8NG94 326 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 OR11H2Q8NH07 326 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 LINC01560Q8TB33 94 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 ZNF502Q8TBZ5 544 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 ZNF479Q96JC4 524 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 PSMG3-AS1Q96PY0 264 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 HIST1H4GQ99525 98 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 C1orf43Q9BWL3 253 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 TM2D2Q9BX73 214 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 NHP2Q9NX24 153 aaKnown RBP2.72□□□□□ -1.97
COL8A1-204ENST00000462604 MRPL35Q9NZE8 188 aaKnown RBP2.72□□□□□ -1.97
COL8A1-204ENST00000462604 MSRB1Q9NZV6 116 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 MED12LQ86YW9 2145 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 SDK1Q7Z5N4 2213 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 WDFY3Q8IZQ1 3526 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGLV2-18A0A075B6J9 118 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGHV4-4A0A075B6R2 117 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGHV3OR16-8A0A075B7F1 116 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGKV2D-26A0A0A0MRZ7 120 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 TRAV21A0A0B4J279 112 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 TRAV40A0A0B4J280 105 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGKV3D-20A0A0C4DH25 116 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGHV3-35A0A0C4DH35 117 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 MYMXA0A1B0GTQ4 84 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 PRSS29PA6NIE9 313 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGLL5B9A064 214 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 E9PLD3 99 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 F8W1H4 67 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 K7EMI3 77 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 OVOL1O14753 267 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 ATP6V0E1O15342 81 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 BUB3O43684 328 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 PPP1R17O96001 155 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 IGHG4P01861 327 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 TRGV3P03979 118 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 S100A4P26447 101 aaKnown RBP2.71□□□□□ -1.98
COL8A1-204ENST00000462604 ARL3P36405 182 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 ASIPP42127 132 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 ATP5G2Q06055 141 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 SCGB2A2Q13296 93 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 RRN3P1Q2M238 152 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 KLK9Q2XQG4 91 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 C12orf74Q32Q52 190 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 C8orf86Q6ZUL3 223 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 RNF182Q8N6D2 247 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 NRACQ8N912 160 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 Q8N9W7 124 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 OR10J6PQ8NGY7 276 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 PHLDA1Q8WV24 401 aaPredicted RBP2.71□□□□□ -1.98
COL8A1-204ENST00000462604 SCGB3A1Q96QR1 104 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 C20orf78Q9BR46 151 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 SMIM2Q9BVW6 85 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 TTTY13Q9BZ97 58 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 AGPAT4-IT1Q9H0P7 198 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 KLK9Q9UKQ9 250 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 HHLA3Q9XRX5 114 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 CHTOPQ9Y3Y2 248 aaKnown RBP2.71□□□□□ -1.98
COL8A1-204ENST00000462604 LENEPQ9Y5L5 61 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 EYSQ5T1H1 3165 aa2.71□□□□□ -1.98
COL8A1-204ENST00000462604 ZNF407Q9C0G0 2248 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 SPEGQ15772 3267 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 GPR179Q6PRD1 2367 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 TRBV7-3A0A075B6L6 115 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 TRAV8-2A0A0B4J237 113 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 IGHV3-66A0A0C4DH42 116 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 IGHV7-4-1A0A0J9YVY3 117 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 TEX48A0A1B0GUV7 120 aa2.7□□□□□ -1.98
COL8A1-204ENST00000462604 A0A1B0GWB2 263 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms