RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 APOC4P55056 127 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 RAB2AP61019 212 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 RHOBP62745 196 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 ODF1Q14990 250 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 DEFB121Q5J5C9 76 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 FFAR4Q5NUL3 377 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 SSX7Q7RTT5 188 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 C9orf62Q8N4C0 152 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 OR8A1Q8NGG7 326 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 HYLS1Q96M11 299 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 CSTL1Q9H114 145 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 TUBA4BQ9H853 241 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 U3KQK5 164 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 BORCS7-ASMTA0A0B4J1R7 106 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 RBAKDNA6NC62 111 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 NBEAP1P0C6P0 100 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 PYYP10082 97 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 CRISP2P16562 243 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 HLA-DMBP28068 263 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 DEFB1P60022 68 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 PMS2P11Q13670 270 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 ACOT6Q3I5F7 207 aaPredicted RBP4.14□□□□□ -1.75
VPS36-202ENST00000462289 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 ACTL10Q5JWF8 245 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 C9orf47Q6ZRZ4 202 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 AKAP14Q86UN6 197 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 RNF182Q8N6D2 247 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 Q8NAQ8 132 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 HSD17B11Q8NBQ5 300 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 SCGB1C1Q8TD33 95 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 MBD3L1Q8WWY6 194 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 PPP1R14BQ96C90 147 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 RCHY1Q96PM5 261 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 ARPC5LQ9BPX5 153 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 OR51M1Q9H341 326 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 C11orf68Q9H3H3 251 aaKnown RBP4.14□□□□□ -1.75
VPS36-202ENST00000462289 PRELID1Q9Y255 219 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 ARL2-SNX15V9GYD0 113 aa4.14□□□□□ -1.75
VPS36-202ENST00000462289 MUC4Q99102 2169 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 TRAV1-1A0A0B4J248 108 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 CTXND1A0A1B0GTU2 59 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 KLLNB2CW77 178 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 UMAD1C9J7I0 102 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 F6UB75 175 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 M0R3E3 92 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 SLC25A5P05141 298 aaKnown RBP4.13□□□□□ -1.75
VPS36-202ENST00000462289 NMBP08949 121 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 CDC34P49427 236 aaPredicted RBP4.13□□□□□ -1.75
VPS36-202ENST00000462289 CNN1P51911 297 aaKnown RBP4.13□□□□□ -1.75
VPS36-202ENST00000462289 TAS2R45P59539 299 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 PSG9Q00887 426 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 DPPA3Q6W0C5 159 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 TMUB2Q71RG4 321 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 STHQ8IWL8 128 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 CCDC28AQ8IWP9 274 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 BAP18Q8IXM2 172 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 OR10G4Q8NGN3 311 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 OR10G9Q8NGN4 311 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 OR10G7Q8NGN6 311 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 TMED6Q8WW62 240 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 RPUSD4Q96CM3 377 aaKnown RBP4.13□□□□□ -1.75
VPS36-202ENST00000462289 PHYHIPLQ96FC7 376 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 ASCL2Q99929 193 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 PAXXQ9BUH6 204 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 C1QTNF4Q9BXJ3 329 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 LENEPQ9Y5L5 61 aa4.13□□□□□ -1.75
VPS36-202ENST00000462289 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 A0A1W2PRE2 83 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 PLAC8L1A1L4L8 177 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 GGTLC3B5MD39 225 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 SPRY2O43597 315 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
VPS36-202ENST00000462289 IGLV2-11P01706 119 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 AMBPP02760 352 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 RBMY1A1P0DJD3 496 aaKnown RBP4.12□□□□□ -1.75
VPS36-202ENST00000462289 RBMY1CP0DJD4 496 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 ARL14EPLP0DKL9 152 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 GCHFRP30047 84 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 TSPOP30536 169 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 FHITP49789 147 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 UBE2L3P68036 154 aaKnown RBP4.12□□□□□ -1.75
VPS36-202ENST00000462289 RBMY1FQ15415 496 aaKnown RBP4.12□□□□□ -1.75
VPS36-202ENST00000462289 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 SLC51BQ86UW2 128 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 ZFAND2AQ8N6M9 145 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 LYPD6BQ8NI32 183 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 IGF2BP2-AS1Q96M15 143 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 C20orf144Q9BQM9 153 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 LINC00467Q9BRT7 94 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 SLC35B3Q9H1N7 401 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 RETNQ9HD89 108 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 TP53TG3Q9ULZ0 132 aa4.12□□□□□ -1.75
VPS36-202ENST00000462289 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms