RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
APP-211ENST00000462267 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
APP-211ENST00000462267 YIPF6Q96EC8 236 aa10.01□□□□□ -0.81
APP-211ENST00000462267 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
APP-211ENST00000462267 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
APP-211ENST00000462267 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
APP-211ENST00000462267 LECT2O14960 151 aa10□□□□□ -0.81
APP-211ENST00000462267 GPX1P07203 203 aa10□□□□□ -0.81
APP-211ENST00000462267 OR4E1P0C645 316 aa10□□□□□ -0.81
APP-211ENST00000462267 AKAIN1P0CW23 69 aa10□□□□□ -0.81
APP-211ENST00000462267 ZNF846Q147U1 533 aa10□□□□□ -0.81
APP-211ENST00000462267 GUK1Q16774 197 aa10□□□□□ -0.81
APP-211ENST00000462267 OR10P1Q8NGE3 313 aa10□□□□□ -0.81
APP-211ENST00000462267 MRPL53Q96EL3 112 aaKnown RBP10□□□□□ -0.81
APP-211ENST00000462267 LINC00477Q96M19 166 aa10□□□□□ -0.81
APP-211ENST00000462267 RBFOX3A6NFN3 312 aa9.99□□□□□ -0.81
APP-211ENST00000462267 H3BP45 60 aa9.99□□□□□ -0.81
APP-211ENST00000462267 H3BQ15 152 aa9.99□□□□□ -0.81
APP-211ENST00000462267 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
APP-211ENST00000462267 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
APP-211ENST00000462267 NMBP08949 121 aa9.99□□□□□ -0.81
APP-211ENST00000462267 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
APP-211ENST00000462267 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
APP-211ENST00000462267 CRISP2P16562 243 aa9.99□□□□□ -0.81
APP-211ENST00000462267 MRPS10P82664 201 aaKnown RBP9.99□□□□□ -0.81
APP-211ENST00000462267 OPCMLQ14982 345 aa9.99□□□□□ -0.81
APP-211ENST00000462267 OR10J3Q5JRS4 329 aa9.99□□□□□ -0.81
APP-211ENST00000462267 RASL10AQ92737 203 aa9.99□□□□□ -0.81
APP-211ENST00000462267 ERCC8Q13216 396 aa9.98□□□□□ -0.81
APP-211ENST00000462267 CLVS1Q8IUQ0 354 aaPredicted RBP9.98□□□□□ -0.81
APP-211ENST00000462267 NHLRC2Q8NBF2 726 aa9.98□□□□□ -0.81
APP-211ENST00000462267 NPVFQ9HCQ7 196 aa9.98□□□□□ -0.81
APP-211ENST00000462267 SCP2D1Q9UJQ7 156 aa9.98□□□□□ -0.81
APP-211ENST00000462267 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
APP-211ENST00000462267 ZNF253O75346 499 aa9.97□□□□□ -0.81
APP-211ENST00000462267 NCS1P62166 190 aa9.97□□□□□ -0.81
APP-211ENST00000462267 Q6ZRU5 148 aa9.97□□□□□ -0.81
APP-211ENST00000462267 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
APP-211ENST00000462267 Q8N976 141 aa9.97□□□□□ -0.81
APP-211ENST00000462267 AP3S1Q92572 193 aa9.97□□□□□ -0.81
APP-211ENST00000462267 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
APP-211ENST00000462267 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
APP-211ENST00000462267 FNDC10F2Z333 226 aa9.96□□□□□ -0.82
APP-211ENST00000462267 GOSR2O14653 212 aa9.96□□□□□ -0.82
APP-211ENST00000462267 COX7A2P2O60397 106 aa9.96□□□□□ -0.82
APP-211ENST00000462267 PFN1P07737 140 aaKnown RBP9.96□□□□□ -0.82
APP-211ENST00000462267 POLR2GP62487 172 aaKnown RBP eCLIP9.96□□□□□ -0.82
APP-211ENST00000462267 SLC38A11Q08AI6 406 aa9.96□□□□□ -0.82
APP-211ENST00000462267 ZNF546Q86UE3 836 aa9.96□□□□□ -0.82
APP-211ENST00000462267 TRAV4A0A0B4J268 109 aa9.95□□□□□ -0.82
APP-211ENST00000462267 M0R3E3 92 aa9.95□□□□□ -0.82
APP-211ENST00000462267 CCNKO75909 580 aa9.95□□□□□ -0.82
APP-211ENST00000462267 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
APP-211ENST00000462267 SMIM4Q8WVI0 70 aa9.95□□□□□ -0.82
APP-211ENST00000462267 BAALCQ8WXS3 180 aa9.95□□□□□ -0.82
APP-211ENST00000462267 SPXQ9BT56 116 aa9.95□□□□□ -0.82
APP-211ENST00000462267 RABL2BQ9UNT1 228 aa9.95□□□□□ -0.82
APP-211ENST00000462267 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
APP-211ENST00000462267 VBP1P61758 197 aa9.94□□□□□ -0.82
APP-211ENST00000462267 RRAS2P62070 204 aaPredicted RBP9.94□□□□□ -0.82
APP-211ENST00000462267 PRR9Q5T870 116 aa9.94□□□□□ -0.82
APP-211ENST00000462267 LELP1Q5T871 98 aa9.94□□□□□ -0.82
APP-211ENST00000462267 C10orf113Q5VZT2 155 aa9.94□□□□□ -0.82
APP-211ENST00000462267 Q6ZQT7 251 aa9.94□□□□□ -0.82
APP-211ENST00000462267 PAXXQ9BUH6 204 aa9.94□□□□□ -0.82
APP-211ENST00000462267 SRRQ9GZT4 340 aa9.94□□□□□ -0.82
APP-211ENST00000462267 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
APP-211ENST00000462267 RNF222A6NCQ9 220 aa9.93□□□□□ -0.82
APP-211ENST00000462267 TOR2AQ5JU69 321 aa9.93□□□□□ -0.82
APP-211ENST00000462267 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
APP-211ENST00000462267 ATP6V0E2Q8NHE4 81 aa9.93□□□□□ -0.82
APP-211ENST00000462267 PSENENQ9NZ42 101 aa9.93□□□□□ -0.82
APP-211ENST00000462267 MGAT4CQ9UBM8 478 aa9.93□□□□□ -0.82
APP-211ENST00000462267 A0A087WXM4 84 aa9.92□□□□□ -0.82
APP-211ENST00000462267 FABP12A6NFH5 140 aa9.92□□□□□ -0.82
APP-211ENST00000462267 AGPAT2O15120 278 aa9.92□□□□□ -0.82
APP-211ENST00000462267 TMEM128Q5BJH2 165 aa9.92□□□□□ -0.82
APP-211ENST00000462267 VCX3AQ9NNX9 186 aa9.92□□□□□ -0.82
APP-211ENST00000462267 CCDC59Q9P031 241 aaKnown RBP9.92□□□□□ -0.82
APP-211ENST00000462267 ANKRD20A5PA0PJZ0 165 aa9.91□□□□□ -0.82
APP-211ENST00000462267 HIST1H1EP10412 219 aaKnown RBP9.91□□□□□ -0.82
APP-211ENST00000462267 GATA1P15976 413 aaPredicted RBP9.91□□□□□ -0.82
APP-211ENST00000462267 ID3Q02535 119 aa9.91□□□□□ -0.82
APP-211ENST00000462267 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
APP-211ENST00000462267 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
APP-211ENST00000462267 MUC21Q5SSG8 566 aa9.9□□□□□ -0.82
APP-211ENST00000462267 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
APP-211ENST00000462267 FUNDC2Q9BWH2 189 aa9.9□□□□□ -0.82
APP-211ENST00000462267 MCUBQ9NWR8 336 aa9.9□□□□□ -0.82
APP-211ENST00000462267 ZNF492Q9P255 531 aa9.9□□□□□ -0.82
APP-211ENST00000462267 TRGV11A0A075B6L2 103 aa9.89□□□□□ -0.83
APP-211ENST00000462267 TRBV7-9A0A0J9YWB2 115 aa9.89□□□□□ -0.83
APP-211ENST00000462267 CTDSPLO15194 276 aa9.89□□□□□ -0.83
APP-211ENST00000462267 HOXB5P09067 269 aa9.89□□□□□ -0.83
APP-211ENST00000462267 VAMP1P23763 118 aa9.89□□□□□ -0.83
APP-211ENST00000462267 TMEM14EPQ6UXP3 125 aa9.89□□□□□ -0.83
APP-211ENST00000462267 RAB2BQ8WUD1 216 aa9.89□□□□□ -0.83
APP-211ENST00000462267 RMI2Q96E14 147 aa9.89□□□□□ -0.83
APP-211ENST00000462267 GTSF1LQ9H1H1 148 aa9.89□□□□□ -0.83
APP-211ENST00000462267 TRAV8-1A0A0A6YYK1 113 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms