RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CT45A5P0DMU8 189 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 CT45A7P0DMV0 189 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 IGKV1-13P0DP09 117 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 BCL2P10415 239 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 CRISP2P16562 243 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 MFAP4P55083 255 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 SUMO2P61956 95 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM97Q5BJF2 176 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 BVES-AS1Q5T3Y7 98 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 FAM162BQ5T6X4 162 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 C16orf82Q7Z2V1 217 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 TTC9CQ8N5M4 171 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM252Q8N6L7 170 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF645Q8N7E2 425 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 GATAD1Q8WUU5 269 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 ADTRPQ96IZ2 230 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 HSD17B10Q99714 261 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 NABP2Q9BQ15 211 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 SRSF8Q9BRL6 282 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 SLC25A33Q9BSK2 321 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 MANBALQ9NQG1 85 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 CCL28Q9NRJ3 127 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 WASHC3Q9Y3C0 194 aa4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 LSM5Q9Y4Y9 91 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-204ENST00000462198 HUWE1Q7Z6Z7 4374 aaKnown RBP4.65□□□□□ -1.66
SMARCC1-204ENST00000462198 LOC102724200A0A096LPH7 203 aaPredicted RBP4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 PIGBOS1A0A0B4J2F0 54 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 NCBP2LA6PVI3 153 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 H0Y980 276 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 H0YJW9 148 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 CHST1O43916 411 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 PROP1O75360 226 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 MOSP00540 346 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 ID1P41134 155 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 LINC00205P59089 165 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 RTL8BQ17RB0 113 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 ABCA11PQ4W5N1 156 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 LYZL2Q7Z4W2 148 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 PDPNQ86YL7 162 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 SBSPONQ8IVN8 264 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 SMIM20Q8N5G0 67 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 OR2K2Q8NGT1 345 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 OR2G3Q8NGZ4 309 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 WIPF2Q8TF74 440 aaPredicted RBP4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 BLNKQ8WV28 456 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 BORCS7Q96B45 105 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 DAZAP1Q96EP5 407 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 C20orf173Q96LM9 149 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 UHRF2Q96PU4 802 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 ANAPC13Q9BS18 74 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 WDR61Q9GZS3 305 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 SIGLEC8Q9NYZ4 499 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 NAT8BQ9UHF3 227 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 MOB4Q9Y3A3 225 aa4.65□□□□□ -1.67
SMARCC1-204ENST00000462198 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 TRGV11A0A075B6L2 103 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 OR2T8A6NH00 312 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 TNFSF12O43508 249 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 FCGR3BO75015 233 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 IGLV2-14P01704 120 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 SERPINE2P07093 398 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 GPX1P07203 203 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 SLC25A6P12236 298 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 DUTP33316 252 aaKnown RBP4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 KRTDAPP60985 99 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 CATR1Q13166 79 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 EBI3Q14213 229 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 PHLDA2Q53GA4 152 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 NMSQ5H8A3 153 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 SERTAD4-AS1Q5TG53 156 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 SLC25A34Q6PIV7 304 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 ZNF818PQ6ZRF7 136 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 Q6ZRM9 215 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 RBPMS2Q6ZRY4 209 aaKnown RBP4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 ERASQ7Z444 233 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 BAGE3Q86Y29 109 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 BAGE2Q86Y30 109 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 Q8N976 141 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 VSTM2AQ8TAG5 236 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 FLYWCH2Q96CP2 140 aaKnown RBP4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 KCNS1Q96KK3 526 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 SMIM7Q9BQ49 75 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 C1QTNF4Q9BXJ3 329 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 SPANXDQ9BXN6 97 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 MS4A6AQ9H2W1 248 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 ZNF702PQ9H963 129 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 NPVFQ9HCQ7 196 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 TSSC4Q9Y5U2 329 aaPredicted RBP4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 RFNGQ9Y644 331 aa4.64□□□□□ -1.67
SMARCC1-204ENST00000462198 TNCP24821 2201 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 TCRBV4S1A1TA0A5B7 111 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 C7orf71A4D174 169 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 GAGE12JA6NER3 117 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 FAM24AA6NFZ4 105 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 LINC00473A8K010 186 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 F8W1H4 67 aa4.63□□□□□ -1.67
SMARCC1-204ENST00000462198 PRYO14603 147 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms